RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 EDNRAP25101 427 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 CDH12P55289 794 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 CSNK2A1P68400 391 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 RNPS1Q15287 305 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 CYBRD1Q53TN4 286 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 EEF1A1P5Q5VTE0 462 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 NUFIP2Q7Z417 695 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 TUSC5Q8IXB3 177 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 PGAM4Q8N0Y7 254 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 CNEP1R1Q8N9A8 125 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 OR6K3Q8NGY3 331 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 STK35Q8TDR2 534 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 ZNF300Q96RE9 604 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 PRRG4Q9BZD6 226 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 KLHL28Q9NXS3 571 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 TEX15Q9BXT5 2789 aa17.36■□□□□ 0.37
SHKBP1-221ENST00000599833 IGKV3D-15A0A087WSY6 115 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 A0A087WUJ7 227 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 EEF1E1-BLOC1S5C9J1V9 151 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 CXCR6O00574 342 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 EEF1E1O43324 174 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 GGT1P19440 569 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 CCKARP32238 428 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 SLC16A1P53985 500 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 ALG10BQ5I7T1 473 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 ENTPD8Q5MY95 495 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 PPP4R4Q6NUP7 873 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 ULK3Q6PHR2 472 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 TSEN54Q7Z6J9 526 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 LUZP2Q86TE4 346 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 SLC43A2Q8N370 569 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 ZNF610Q8N9Z0 462 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 VANGL1Q8TAA9 524 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 BCAS4Q8TDM0 211 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 DNAJA4Q8WW22 397 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 RASSF5Q8WWW0 418 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 KTI12Q96EK9 354 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 MCHR1Q99705 422 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 ZNF426Q9BUY5 554 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 GALNT8Q9NY28 637 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 MAST4O15021 2626 aa17.35■□□□□ 0.37
SHKBP1-221ENST00000599833 PRKD3O94806 890 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 FPR1P21462 350 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 FUT4P22083 530 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 PCYT1AP49585 367 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 SELENOWP63302 87 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 SNTB1Q13884 538 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 CEACAM7Q14002 265 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 PDK3Q15120 406 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 LRRC23Q53EV4 343 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 SWT1Q5T5J6 900 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 PRR14LQ5THK1 2151 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 C1orf140Q5VVS0 124 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 ZNF613Q6PF04 617 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 MEX3BQ6ZN04 569 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 CBLL1Q75N03 491 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 RANBP3LQ86VV4 465 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 CARM1Q86X55 608 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 RNF148Q8N7C7 305 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 FAM156AQ8NDB6 213 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 PRSS27Q9BQR3 290 aa17.34■□□□□ 0.37
SHKBP1-221ENST00000599833 CPSF4LA6NMK7 179 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 ZNF724A8MTY0 619 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 NDUFAB1O14561 156 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 HSD17B1P14061 328 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 NCK1P16333 377 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 IDUAP35475 653 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 OR1E2P47887 323 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 OR2B6P58173 313 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 LTBQ06643 244 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 RASGEF1BQ0VAM2 473 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 PAQR6Q6TCH4 344 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 TFAP2EQ6VUC0 442 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 VTCN1Q7Z7D3 282 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 P3H2Q8IVL5 708 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 RBM15BQ8NDT2 890 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 SLC26A7Q8TE54 656 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 ADAMTS16Q8TE57 1224 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 MARVELD3Q96A59 401 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 SLC47A1Q96FL8 570 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 NSL1Q96IY1 281 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 KCTD14Q9BQ13 255 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 RBM24Q9BX46 236 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 SEC14L4Q9UDX3 406 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 EGFL7Q9UHF1 273 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 SLC13A4Q9UKG4 626 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 BAG5Q9UL15 447 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 SH3GLB1Q9Y371 365 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 EMC9Q9Y3B6 208 aa17.33■□□□□ 0.36
SHKBP1-221ENST00000599833 AQP7P3A6NL99 342 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 HNRNPRO43390 633 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 CHP2O43745 196 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 YES1P07947 543 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 PNMTP11086 282 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 SLC35A1P78382 337 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 SORDQ00796 357 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 SLC17A1Q14916 467 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 OR7A5Q15622 319 aa17.32■□□□□ 0.36
SHKBP1-221ENST00000599833 GTF2IRD2BQ6EKJ0 949 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms