RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 KATNB1Q9BVA0 655 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 AKIRIN1Q9H9L7 192 aaPredicted RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 EXOSC3Q9NQT5 275 aaKnown RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 IDSB3KWA1 339 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 SCRG1O75711 98 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TFP02787 698 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TACR3P29371 465 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 GALEQ14376 348 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ZNF74Q16587 644 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 FAM69BQ5VUD6 431 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TMEM91Q6ZNR0 172 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 THAP3Q8WTV1 239 aaPredicted RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SMPDL3BQ92485 455 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 NRIP3Q9NQ35 241 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 OR6C68A6NDL8 312 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 GABRPO00591 440 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TO15178 435 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SCO2O43819 266 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 PPM1BO75688 479 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SERPINI2O75830 405 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 IL1AP01583 271 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 DCAF7P61962 342 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ZNF45Q02386 682 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ACY1Q03154 408 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ZMAT1Q5H9K5 638 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 C1QL3Q5VWW1 255 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SLC29A4Q7RTT9 530 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 SLC22A16Q86VW1 577 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 APCDD1LQ8NCL9 501 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 NPEPL1Q8NDH3 523 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 DDOQ99489 341 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 CTRCQ99895 268 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 TGIF2Q9GZN2 237 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 LAT2Q9GZY6 243 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 ASB6Q9NWX5 421 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 OCIAD1Q9NX40 245 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 BABAM2Q9NXR7 383 aa13.19□□□□□ -0.3
VRK3-217ENST00000599538 MRTO4Q9UKD2 239 aaKnown RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 ZNF346Q9UL40 294 aaKnown RBP13.19□□□□□ -0.3
VRK3-217ENST00000599538 IGLV3-12A0A075B6K2 115 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TRDV1A0A1B0GX56 115 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ADAM10O14672 748 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 NDUFB5O43674 189 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ANKRD34CP0C6C1 535 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ITPKBP27987 946 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 FGF9P31371 208 aaPredicted RBP13.18□□□□□ -0.3
VRK3-217ENST00000599538 OR12D2P58182 307 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 E2F1Q01094 437 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TUBA3EQ6PEY2 450 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 DPY19L2P2Q6ZN68 376 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 RABEPKQ7Z6M1 372 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ANKRD37Q7Z713 158 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 Q96M85 177 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 NECAB3Q96P71 396 aaPredicted RBP13.18□□□□□ -0.3
VRK3-217ENST00000599538 SLC19A3Q9BZV2 496 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 MMP25Q9NPA2 562 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 PCDHGB6Q9Y5F9 930 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 NCR1O76036 304 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 IFNGP01579 166 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 F13BP05160 661 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 PNMTP11086 282 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ETV6P41212 452 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 NAA10P41227 235 aaPredicted RBP13.18□□□□□ -0.3
VRK3-217ENST00000599538 RNF4P78317 190 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 PSPHP78330 225 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TMPRSS11AQ6ZMR5 421 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 PLEKHG7Q6ZR37 379 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 FAM181AQ8N9Y4 354 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 C17orf47Q8NEP4 570 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TAAR8Q969N4 342 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 SLC30A2Q9BRI3 323 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 TMEM43Q9BTV4 400 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
VRK3-217ENST00000599538 PPIL3Q9H2H8 161 aaKnown RBP13.18□□□□□ -0.3
VRK3-217ENST00000599538 MIXL1Q9H2W2 232 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms