RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 H1F0P07305 194 aaKnown RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 GLI4P10075 376 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 RAP2AP10114 183 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 FUT1P19526 365 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 RRM2P31350 389 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 IDUAP35475 653 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 NUP107P57740 925 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 PMPCAQ10713 525 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 ST3GAL3Q11203 375 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 LAPTM4AQ15012 233 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 TRAM2Q15035 370 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 PON3Q15166 354 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 FGD3Q5JSP0 725 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 SWT1Q5T5J6 900 aaKnown RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 PODNL1Q6PEZ8 512 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CHMP1BQ7LBR1 199 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 PIWIL3Q7Z3Z3 882 aaKnown RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CYP4Z1Q86W10 505 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CCDC103Q8IW40 242 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 LRRC17Q8N6Y2 441 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 TMEM239Q8WW34 195 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 DHRS1Q96LJ7 313 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 MOGAT1Q96PD6 335 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 DMRTA2Q96SC8 542 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 POTEKPQ9BYX7 375 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 POLR2J3Q9H1A7 115 aaKnown RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 TP63Q9H3D4 680 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 C20orf141Q9NUB4 165 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CCM2LQ9NUG4 571 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CLCF1Q9UBD9 225 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 STOML1Q9UBI4 398 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 CLEC4AQ9UMR7 237 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 ARHGAP21Q5T5U3 1957 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 MED12LQ86YW9 2145 aa13.88□□□□□ -0.19
SMCO4-206ENST00000596676 TRAV36DV7A0A075B6V5 113 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 GJE1A6NN92 205 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 FTCDNL1E5RQL4 147 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 SMAD9O15198 467 aaKnown RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 WDR1O75083 606 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 TIPRLO75663 272 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 AKR7A3O95154 331 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 CH25HO95992 272 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 BGLAPP02818 100 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 GPIP06744 558 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 UMPSP11172 480 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 AGFG1P52594 562 aaKnown RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 IST1P53990 364 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 ACTR3P61158 418 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 RPS3AP61247 264 aaKnown RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 ZNF239Q16600 458 aaKnown RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 EXOC3L2Q2M3D2 409 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 NSUN5P2Q63ZY6 315 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 TMEM99Q8N816 258 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 PAPD5Q8NDF8 572 aaKnown RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 SLC7A13Q8TCU3 470 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 PYDC1Q8WXC3 89 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 ZNF775Q96BV0 537 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 RAB3IPQ96QF0 476 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-206ENST00000596676 TTYH2Q9BSA4 534 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 FUZQ9BT04 418 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 TMEM43Q9BTV4 400 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 KLHL13Q9P2N7 655 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 MEMO1Q9Y316 297 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 HIVEP3Q5T1R4 2406 aa13.87□□□□□ -0.19
SMCO4-206ENST00000596676 PHF3Q92576 2039 aaKnown RBP13.86□□□□□ -0.19
SMCO4-206ENST00000596676 SLC22A20A6NK97 555 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 FIGNL2A6NMB9 653 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 ENO4A6NNW6 628 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 ENTPD5O75356 428 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 GADD45GO95257 159 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 AHSA1O95433 338 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 PMS2P2O95744 297 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 THRBP10828 461 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 GABRA1P14867 456 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 ITGA2P17301 1181 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 MAKP20794 623 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 CLK1P49759 484 aaKnown RBP13.86□□□□□ -0.19
SMCO4-206ENST00000596676 RAC3P60763 192 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 SRSF1Q07955 248 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMCO4-206ENST00000596676 FOXF2Q12947 444 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 PDSS1Q5T2R2 415 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 B3GNT6Q6ZMB0 384 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 TMEM179BQ7Z7N9 219 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 GCNT2Q8N0V5 402 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 KDM8Q8N371 416 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 C10orf53Q8N6V4 93 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 NAXEQ8NCW5 288 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 ABHD3Q8WU67 409 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 MPP4Q96JB8 637 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 DOCK7Q96N67 2140 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 U3KQV3 271 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 PCNX1Q96RV3 2341 aa13.86□□□□□ -0.19
SMCO4-206ENST00000596676 A0A1W2PRQ8 180 aa13.85□□□□□ -0.19
SMCO4-206ENST00000596676 CD8B2A6NJW9 211 aa13.85□□□□□ -0.19
SMCO4-206ENST00000596676 E9PLN8 166 aa13.85□□□□□ -0.19
SMCO4-206ENST00000596676 J3QKU1 62 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms