RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ZNF682O95780 498 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CRHP06850 196 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 C8BP07358 591 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 TCN1P20061 433 aaPredicted RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 FPR1P21462 350 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CBLP22681 906 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 IDUAP35475 653 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 OR1E2P47887 323 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CLK1P49759 484 aaKnown RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 SLC35A1P78382 337 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 RNPS1Q15287 305 aaKnown RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 NRF1Q16656 503 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CYBRD1Q53TN4 286 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 ALG10BQ5I7T1 473 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 C8orf82Q6P1X6 216 aaPredicted RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 DEF8Q6ZN54 512 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 FAM214BQ7L5A3 538 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 CARM1Q86X55 608 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 CCDC103Q8IW40 242 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 OR4D11Q8NGI4 311 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 OR6T1Q8NGN1 323 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 RNF128Q8TEB7 428 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 RNASE6Q93091 150 aaKnown RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 SLC35B4Q969S0 331 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 FAM162AQ96A26 154 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 NSL1Q96IY1 281 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 NAA11Q9BSU3 229 aaPredicted RBP9.89□□□□□ -0.83
LIG1-211ENST00000596457 EVA1AQ9H8M9 152 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 GLRX2Q9NS18 164 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 ADPRHL2Q9NX46 363 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 BAG5Q9UL15 447 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 SLC9A8Q9Y2E8 581 aa9.89□□□□□ -0.83
LIG1-211ENST00000596457 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 MPDZO75970 2070 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 B2RBV5 119 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 CYTIPO60759 359 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 SS18L1O75177 396 aaPredicted RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 GMNNO75496 209 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 AKR7A3O95154 331 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 GPIP06744 558 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 AGTR1P30556 359 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 CRYBA2P53672 197 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 CDH12P55289 794 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 NPTX1Q15818 432 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 C1orf140Q5VVS0 124 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 C16orf89Q6UX73 402 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 NUFIP2Q7Z417 695 aaKnown RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 GDF7Q7Z4P5 450 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 DEFB107AQ8IZN7 70 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 SLC43A2Q8N370 569 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 FAM156AQ8NDB6 213 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 OR6K3Q8NGY3 331 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 LINC01560Q8TB33 94 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 DNAJA4Q8WW22 397 aaPredicted RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 SLC47A1Q96FL8 570 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 ZNF300Q96RE9 604 aaPredicted RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 CDRT15Q96T59 188 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 SPOCK3Q9BQ16 436 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 POTEKPQ9BYX7 375 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 SPAG4Q9NPE6 437 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 GALNT8Q9NY28 637 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 JKAMPQ9P055 326 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 C6orf203Q9P0P8 240 aaPredicted RBP9.88□□□□□ -0.83
LIG1-211ENST00000596457 KLHL9Q9P2J3 617 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 CACNA1CQ13936 2221 aa9.88□□□□□ -0.83
LIG1-211ENST00000596457 INTS1Q8N201 2190 aaKnown RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 A8MXE2 369 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 ZNF814B7Z6K7 855 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 MSTNO14793 375 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 RAMP1O60894 148 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 AHSA1O95433 338 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 SERPINA1P01009 418 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 CGAP01215 116 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 YES1P07947 543 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 PNMTP11086 282 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 POU2F1P14859 743 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 GTF2E2P29084 291 aaKnown RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 MSX2P35548 267 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 MAP2K6P52564 334 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 TAS2R41P59536 307 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 SELENOWP63302 87 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 IL1RL1Q01638 556 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 FAM27E3Q08E93 113 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 KRT72Q14CN4 511 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 OTUD3Q5T2D3 398 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 FAM91A1Q658Y4 838 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 GLYATQ6IB77 296 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 FKBP9P1Q75LS8 142 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 KIF18BQ86Y91 864 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 DMRTC2Q8IXT2 367 aaPredicted RBP9.87□□□□□ -0.83
LIG1-211ENST00000596457 PGAM4Q8N0Y7 254 aa9.87□□□□□ -0.83
LIG1-211ENST00000596457 C10orf53Q8N6V4 93 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms