RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FOXF1Q12946 379 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 PLPPR5Q32ZL2 321 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 GLYR1Q49A26 553 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 RASSF6Q6ZTQ3 369 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 SULF2Q8IWU5 870 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 MDS2Q8NDY4 140 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 ATP6V1C2Q8NEY4 427 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 OR2M7Q8NG81 312 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 STK35Q8TDR2 534 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 TM9SF4Q92544 642 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 CNBD2Q96M20 576 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 GPA33Q99795 319 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 GABARAPL3Q9BY60 117 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 ZFP64Q9NPA5 681 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 MEPEQ9NQ76 525 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 DEPPQ9NTK1 212 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 C20orf141Q9NUB4 165 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 HRH3Q9Y5N1 445 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 SPIN1Q9Y657 262 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
SHKBP1-209ENST00000595803 PCNX3Q9H6A9 2034 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 IGKV1D-42A0A075B6H8 117 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 B4DXG7 233 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 NME2P1O60361 137 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 TRAPPC6AO75865 159 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 OR7A10O76100 309 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 RCBTB2O95199 551 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 CH25HO95992 272 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 TFPIP10646 304 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 MAKP20794 623 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 NME2P22392 152 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 TCEA1P23193 301 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ADH6P28332 368 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 SRD5A2P31213 254 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 RPS6KA3P51812 740 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 MAP2K6P52564 334 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 PLGLB1Q02325 96 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF766Q5HY98 468 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 IGFL2Q6UWQ7 119 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 GALNTL5Q7Z4T8 443 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ZADH2Q8N4Q0 377 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 TMEM178AQ8NBL3 297 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 POC1BQ8TC44 478 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 OSTF1Q92882 214 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 SMAD5Q99717 465 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 APOL4Q9BPW4 351 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 GRIP2Q9C0E4 1043 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 ADNPQ9H2P0 1102 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 B4GALT7Q9UBV7 327 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 LRCH1Q9Y2L9 728 aa11.81□□□□□ -0.52
SHKBP1-209ENST00000595803 TRAV36DV7A0A075B6V5 113 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 PINLYPA6NC86 204 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 SHISA8B8ZZ34 492 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 ETV2O00321 342 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 BCKDKO14874 412 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF208O43345 1280 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 KLF4O43474 513 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 HCN1O60741 890 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 SOX14O95416 240 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 AHSA1O95433 338 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 IGF2P01344 180 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 BMP7P18075 431 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 CHMP24386 653 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 FKBP2P26885 142 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 IL18R1Q13478 541 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 KEAP1Q14145 624 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 PTGES3Q15185 160 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 CMPK2Q5EBM0 449 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 KRT80Q6KB66 452 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 OAFQ86UD1 273 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 C8orf59Q8N0T1 100 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 SETD9Q8NE22 299 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 OR5M1Q8NGP8 315 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 OR14L1PQ8NHC6 308 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 TEX47Q8TBZ9 253 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 SCMH1Q96GD3 660 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 MUS81Q96NY9 551 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 TEX12Q9BXU0 123 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 HES7Q9BYE0 225 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 POTEKPQ9BYX7 375 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 CHRNA9Q9UGM1 479 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 RPH3AQ9Y2J0 694 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 MRPS18CQ9Y3D5 142 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 CPAMD8Q8IZJ3 1885 aa11.8□□□□□ -0.52
SHKBP1-209ENST00000595803 SETD2Q9BYW2 2564 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms