RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 IFT52Q9Y366 437 aa16.91■□□□□ 0.3
GRAMD1A-205ENST00000595596 GPC6Q9Y625 555 aaPredicted RBP16.91■□□□□ 0.3
GRAMD1A-205ENST00000595596 SONP18583 2426 aaKnown RBP16.91■□□□□ 0.3
GRAMD1A-205ENST00000595596 ABCA1O95477 2261 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 A0A087WZY1 265 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 FAM220BPB1ANY3 271 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 SS18L1O75177 396 aaPredicted RBP16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 SYNGR4O95473 234 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 PLAUP00749 431 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 PCBP3P57721 371 aaKnown RBP16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 RPS4XP62701 263 aaKnown RBP16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 MXRA7P84157 204 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 CBFBQ13951 182 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 TOMM34Q15785 309 aaPredicted RBP16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 ETFDHQ16134 617 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 PLPPR5Q32ZL2 321 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 GTF2IRD2BQ6EKJ0 949 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 GTF2IRD2Q86UP8 949 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 WFDC8Q8IUA0 241 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 SLC30A8Q8IWU4 369 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 OR5W2Q8NH69 310 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 ZNF524Q96C55 264 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 REXO5Q96IC2 774 aaKnown RBP16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 NSL1Q96IY1 281 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 ZNF607Q96SK3 696 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 RLIMQ9NVW2 624 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 ZNF232Q9UNY5 417 aa16.9■□□□□ 0.3
GRAMD1A-205ENST00000595596 CDHR4A6H8M9 788 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 GCM2O75603 506 aaPredicted RBP16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 LINGO3P0C6S8 592 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 ZNF17P17021 662 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 RYKP34925 604 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 SLC25A3Q00325 362 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 LIPEQ05469 1076 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 DMTNQ08495 405 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 CLEC12BQ2HXU8 276 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 TMEM44Q2T9K0 475 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 PDSS1Q5T2R2 415 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 RNF220Q5VTB9 566 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 ERICH5Q6P6B1 374 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 GGNQ86UU5 652 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 CLIP4Q8N3C7 705 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 OR2T12Q8NG77 320 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 TACO1Q9BSH4 297 aaKnown RBP16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 SPATA5L1Q9BVQ7 753 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 RSPO3Q9BXY4 272 aaPredicted RBP16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 ACTR6Q9GZN1 396 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 EXOSC3Q9NQT5 275 aaKnown RBP16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 LAMP3Q9UQV4 416 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 AP3M1Q9Y2T2 418 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 CHST2Q9Y4C5 530 aa16.89■□□□□ 0.29
GRAMD1A-205ENST00000595596 AP3D1O14617 1153 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 ADAM11O75078 769 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 IFNA2P01563 188 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 OPN1SWP03999 348 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 TP53P04637 393 aaPredicted RBP16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 PSMB1P20618 241 aaKnown RBP16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 IDUAP35475 653 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 SLC6A8P48029 635 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 FOXF1Q12946 379 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 VEZF1Q14119 521 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 QPRTQ15274 297 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 ADAM5Q6NVV9 412 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 ARMC8Q8IUR7 673 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 MICU2Q8IYU8 434 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 STEAP2Q8NFT2 490 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 OR10D3Q8NH80 312 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 POC1BQ8TC44 478 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 AKAP1Q92667 903 aaKnown RBP eCLIP16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 ZBTB8AQ96BR9 441 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 RNF145Q96MT1 663 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 HDHD5Q9BXW7 423 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 NGBQ9NPG2 151 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 CLEC4AQ9UMR7 237 aa16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 FBN1P35555 2871 aaKnown RBP16.88■□□□□ 0.29
GRAMD1A-205ENST00000595596 CR1P17927 2039 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 ELOVL7A1L3X0 281 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 TPST1O60507 370 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 DNAJA2O60884 412 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 SERPINB7O75635 380 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 GKN3PP0CG01 181 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PRKCAP17252 672 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PGCP20142 388 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PRKAR1BP31321 381 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 GSK3BP49841 420 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 RAC1P63000 192 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 INTS11Q5TA45 600 aaKnown RBP16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PODNL1Q6PEZ8 512 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PATL1Q86TB9 770 aaKnown RBP16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 COMTD1Q86VU5 262 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 PGAM4Q8N0Y7 254 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 GTPBP8Q8N3Z3 284 aaPredicted RBP16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 ALG2Q9H553 416 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 ARMC7Q9H6L4 198 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 SPAG4Q9NPE6 437 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 ADA2Q9NZK5 511 aa16.87■□□□□ 0.29
GRAMD1A-205ENST00000595596 TMEM181Q9P2C4 612 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms