RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PRPS1P60891 318 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 SQSTM1Q13501 440 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 GUSBP11Q6P575 273 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 OR8H2Q8N162 312 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 EDAQ92838 391 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 DAZLQ92904 295 aaKnown RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 ITPKCQ96DU7 683 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 ATXN7L1Q9ULK2 861 aaPredicted RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 CABIN1Q9Y6J0 2220 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 C2orf92A0A1B0GVN3 265 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 ICOSLGO75144 302 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 CFL1P23528 166 aaKnown RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 RPL4P36578 427 aaKnown RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 NSDHLQ15738 373 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF574Q6ZN55 896 aaPredicted RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 VASH1Q7L8A9 365 aaPredicted RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 POMGNT2Q8NAT1 580 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 KIAA1143Q96AT1 154 aaPredicted RBP17.99■□□□□ 0.47
CLIP3-206ENST00000593074 C4orf36Q96KX1 117 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 GAL3ST4Q96RP7 486 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 ADOQ96SZ5 270 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 DDOQ99489 341 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 VN1R1Q9GZP7 353 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 FSCN3Q9NQT6 498 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 NOX1Q9Y5S8 564 aa17.99■□□□□ 0.47
CLIP3-206ENST00000593074 E9PI62 339 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 TO15178 435 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 SIGLEC6O43699 453 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 IDH3BO43837 385 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 MTNR1BP49286 362 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 CCR4P51679 360 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 PPP3R1P63098 170 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF74Q16587 644 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.98■□□□□ 0.47
CLIP3-206ENST00000593074 DESI1Q6ICB0 168 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 XKRXQ6PP77 449 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 FAM131AQ6UXB0 335 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 NPEPL1Q8NDH3 523 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 DIRAS2Q96HU8 199 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 ATF6BQ99941 703 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 UNC13CQ8NB66 2214 aa17.98■□□□□ 0.47
CLIP3-206ENST00000593074 DVL2O14641 736 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 APOA1P02647 267 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 F8A1P23610 371 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 TRAM1Q15629 374 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 BAK1Q16611 211 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 GXYLT1Q4G148 440 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 LCN1P1Q5VSP4 162 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 SSX6Q7RTT6 188 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 TMPRSS9Q7Z410 1059 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 ZMYND19Q96E35 227 aaPredicted RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 NMNAT2Q9BZQ4 307 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 LAT2Q9GZY6 243 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 RNF32Q9H0A6 362 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 HIF3AQ9Y2N7 669 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 FER1L5A0AVI2 2057 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 ARID1BQ8NFD5 2236 aaPredicted RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 TFP02787 698 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 IL7P13232 177 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 AZGP1P25311 298 aaKnown RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 OR12D2P58182 307 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 CCBE1Q6UXH8 406 aaPredicted RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 PRSS58Q8IYP2 241 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 PRR22Q8IZ63 422 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 GDPD1Q8N9F7 314 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 OR1N1Q8NGS0 311 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 SMAP2Q8WU79 429 aaPredicted RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF524Q96C55 264 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 CNN2Q99439 309 aaKnown RBP17.97■□□□□ 0.47
CLIP3-206ENST00000593074 SLC7A5P2Q9GIP4 190 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 WWTR1Q9GZV5 400 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 C12orf10Q9HB07 376 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 MMP25Q9NPA2 562 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 SRPK3Q9UPE1 567 aa17.97■□□□□ 0.47
CLIP3-206ENST00000593074 LY6G6EA0A0G2JKS1 128 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 FABP12A6NFH5 140 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 J3QLW9 94 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 TSPAN2O60636 221 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 NCR1O76036 304 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 CFIP05156 583 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 ZNF19P17023 458 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 IL12BP29460 328 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 GRK6P43250 576 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 SLC6A8P48029 635 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 CCL7P80098 99 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 E2F1Q01094 437 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 ACY1Q03154 408 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 EGR4Q05215 589 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 CD300CQ08708 224 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 DMKNQ6E0U4 476 aaPredicted RBP17.96■□□□□ 0.47
CLIP3-206ENST00000593074 ARL9Q6T311 187 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 NUP54Q7Z3B4 507 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 RFLNBQ8N5W9 214 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 PGLYRP3Q96LB9 341 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 NMNAT3Q96T66 252 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 RTN4RQ9BZR6 473 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 NRSN2Q9GZP1 204 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 COPS7AQ9UBW8 275 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 MKL2Q9ULH7 1088 aa17.96■□□□□ 0.47
CLIP3-206ENST00000593074 U3KQA8 63 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms