RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 AURKBQ96GD4 344 aaPredicted RBP20.51■□□□□ 0.87
MBD3-211ENST00000592965 ZNF443Q9Y2A4 671 aaPredicted RBP20.51■□□□□ 0.87
MBD3-211ENST00000592965 FLVCR1Q9Y5Y0 555 aa20.51■□□□□ 0.87
MBD3-211ENST00000592965 HEATR1Q9H583 2144 aaKnown RBP20.51■□□□□ 0.87
MBD3-211ENST00000592965 A0A1W2PP18 115 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 SHISA9B4DS77 424 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 RAD51DO75771 328 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 SLC17A1Q14916 467 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 LARS2Q15031 903 aaKnown RBP20.5■□□□□ 0.87
MBD3-211ENST00000592965 ETFDHQ16134 617 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 AGBL2Q5U5Z8 902 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 WBP2NLQ6ICG8 309 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 CASP12Q6UXS9 341 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 TMEM19Q96HH6 336 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 C7orf26Q96N11 449 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 PARPBPQ9NWS1 579 aa20.5■□□□□ 0.87
MBD3-211ENST00000592965 MAGED1Q9Y5V3 778 aaPredicted RBP20.5■□□□□ 0.87
MBD3-211ENST00000592965 SONP18583 2426 aaKnown RBP20.49■□□□□ 0.87
MBD3-211ENST00000592965 CIB4A0PJX0 185 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 PDLIM1O00151 329 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 GKN3PP0CG01 181 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 CXCR1P25024 350 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 IDUAP35475 653 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 PGGHGQ32M88 737 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 OR7E24Q6IFN5 339 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 LSRQ86X29 649 aaPredicted RBP20.49■□□□□ 0.87
MBD3-211ENST00000592965 GTF2H4Q92759 462 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 TRMT61AQ96FX7 289 aaKnown RBP20.49■□□□□ 0.87
MBD3-211ENST00000592965 RADILQ96JH8 1075 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 PAIP1Q9H074 479 aaKnown RBP20.49■□□□□ 0.87
MBD3-211ENST00000592965 SLC25A15Q9Y619 301 aa20.49■□□□□ 0.87
MBD3-211ENST00000592965 A0A0G2JPF8 293 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 TMEM247A6NEH6 219 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 LIPT2A6NK58 231 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 CCT8L1PA6NM43 557 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 HNRNPCL2B2RXH8 293 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 HNRNPCL3B7ZW38 293 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 ABCD4O14678 606 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 HNRNPCL1O60812 293 aaKnown RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 GPIP06744 558 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 ITGA5P08648 1049 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 HNRNPCL4P0DMR1 293 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 BMP2P12643 396 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 HOXB9P17482 250 aaPredicted RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 CDH11P55287 796 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 COPZ1P61923 177 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 FAPQ12884 760 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 GABRA6Q16445 453 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 RPS26P11Q5JNZ5 115 aaPredicted RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 PRAMEF8Q5VWM4 474 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 PRAMEF7Q5VXH5 474 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 DTX2Q86UW9 622 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 CLIP4Q8N3C7 705 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 GTPBP3Q969Y2 492 aaKnown RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 TMEM45BQ96B21 275 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 MUS81Q96NY9 551 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 SF3B5Q9BWJ5 86 aaKnown RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 SPATA9Q9BWV2 254 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 AMBRA1Q9C0C7 1298 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 GRIP2Q9C0E4 1043 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 RAD21L1Q9H4I0 556 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 CACYBPQ9HB71 228 aaKnown RBP20.48■□□□□ 0.87
MBD3-211ENST00000592965 BCL2L10Q9HD36 194 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 FAIMQ9NVQ4 179 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 DCTN4Q9UJW0 460 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 ZNF232Q9UNY5 417 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 CHST2Q9Y4C5 530 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 PCDHB14Q9Y5E9 798 aa20.48■□□□□ 0.87
MBD3-211ENST00000592965 TGDSO95455 350 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 FADDQ13158 208 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 CEACAM7Q14002 265 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 OTUD3Q5T2D3 398 aaPredicted RBP20.47■□□□□ 0.87
MBD3-211ENST00000592965 KLHL17Q6TDP4 642 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 TMEM108Q6UXF1 575 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 CADM2Q8N3J6 435 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 C1orf162Q8NEQ5 155 aaPredicted RBP20.47■□□□□ 0.87
MBD3-211ENST00000592965 OR52N5Q8NH56 324 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 TRAF4Q9BUZ4 470 aaPredicted RBP20.47■□□□□ 0.87
MBD3-211ENST00000592965 PIF1Q9H611 641 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 ARMC7Q9H6L4 198 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 A4GALTQ9NPC4 353 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 TCF7L2Q9NQB0 619 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 CISD1Q9NZ45 108 aaKnown RBP20.47■□□□□ 0.87
MBD3-211ENST00000592965 MGAT4BQ9UQ53 548 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 IFT52Q9Y366 437 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 ABCA1O95477 2261 aa20.47■□□□□ 0.87
MBD3-211ENST00000592965 A0A096LPI6 279 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 AQP7P3A6NL99 342 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 A8MVM7 634 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 POLR3GO15318 223 aaPredicted RBP20.46■□□□□ 0.87
MBD3-211ENST00000592965 PRG2P13727 222 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 PTAFRP25105 342 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 FOXG1P55316 489 aaPredicted RBP20.46■□□□□ 0.87
MBD3-211ENST00000592965 STX1BP61266 288 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 RGNQ15493 299 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 OR7A5Q15622 319 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 SLC2A7Q6PXP3 512 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 C17orf78Q8N4C9 275 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 TMEM99Q8N816 258 aa20.46■□□□□ 0.87
MBD3-211ENST00000592965 OR9K2Q8NGE7 335 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms