RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 EMC3Q9P0I2 261 aa17.82■□□□□ 0.44
CIRBP-239ENST00000592467 NOSIPQ9Y314 301 aaKnown RBP17.82■□□□□ 0.44
CIRBP-239ENST00000592467 FLVCR1Q9Y5Y0 555 aa17.82■□□□□ 0.44
CIRBP-239ENST00000592467 TPST1O60507 370 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 EIF1BO60739 113 aaKnown RBP17.81■□□□□ 0.44
CIRBP-239ENST00000592467 NCF2P19878 526 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-239ENST00000592467 IL32P24001 234 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 PRKAR1BP31321 381 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 NR1H2P55055 460 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 FOXG1P55316 489 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-239ENST00000592467 CDK6Q00534 326 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 CEACAM7Q14002 265 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 FBXW9Q5XUX1 488 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 CGB2Q6NT52 195 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 REEP3Q6NUK4 255 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 DHRS4L2Q6PKH6 230 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 PTOV1Q86YD1 416 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 ZNF433Q8N7K0 673 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-239ENST00000592467 WFDC11Q8NEX6 87 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 HSD17B8Q92506 261 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 LEF1Q9UJU2 399 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-239ENST00000592467 MTORP42345 2549 aa17.81■□□□□ 0.44
CIRBP-239ENST00000592467 PDLIM1O00151 329 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 GPR171O14626 319 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 IGHV3-9P01782 118 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 CD99P14209 185 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 CXCR1P25024 350 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 HTR2AP28223 471 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 ADSLP30566 484 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-239ENST00000592467 IDUAP35475 653 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 EGR4Q05215 589 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 SELPLGQ14242 412 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 NCMAPQ5T1S8 102 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 C6orf89Q6UWU4 347 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 C20orf204Q6ZNR8 217 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 ZNF100Q8IYN0 542 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 TMEM99Q8N816 258 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 ZIC4Q8N9L1 334 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 USB1Q9BQ65 265 aaKnown RBP17.8■□□□□ 0.44
CIRBP-239ENST00000592467 WFDC6Q9BQY6 131 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 MALT1Q9UDY8 824 aa17.8■□□□□ 0.44
CIRBP-239ENST00000592467 A8MVM7 634 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 C5orf58C9J3I9 102 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 FTCDNL1E5RQL4 147 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 FZD7O75084 574 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 AKR7A3O95154 331 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 COPZ1P61923 177 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 SCARB2Q14108 478 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 OR7A5Q15622 319 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 METTL21CQ5VZV1 264 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 DHDDSQ86SQ9 333 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 LSMEM1Q8N8F7 131 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 TSPEARQ8WU66 669 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 APH1AQ96BI3 265 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 ANKRD27Q96NW4 1050 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 NAA11Q9BSU3 229 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-239ENST00000592467 PTDSS2Q9BVG9 487 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 ARMC7Q9H6L4 198 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-239ENST00000592467 CADP27708 2225 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 ZFHX3Q15911 3703 aa17.79■□□□□ 0.44
CIRBP-239ENST00000592467 NF1P21359 2839 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 A0A0G2JND7 137 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 DPRXA6NFQ7 191 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 AQP7P3A6NL99 342 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 FBP2O00757 339 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 GPIP06744 558 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 ITGA5P08648 1049 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 PCBP3P57721 371 aaKnown RBP17.78■□□□□ 0.44
CIRBP-239ENST00000592467 OTUD3Q5T2D3 398 aaPredicted RBP17.78■□□□□ 0.44
CIRBP-239ENST00000592467 C1orf140Q5VVS0 124 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 ADAM5Q6NVV9 412 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 LRRC75A-AS1Q8N1F1 130 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 STK35Q8TDR2 534 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 PIGTQ969N2 578 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 TMEM45BQ96B21 275 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 CGREF1Q99674 301 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 TMEM120AQ9BXJ8 343 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 NPAP1Q9NZP6 1156 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 TRIM33Q9UPN9 1127 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 CORO2BQ9UQ03 480 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 NDUFAF1Q9Y375 327 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 ARID1AO14497 2285 aa17.78■□□□□ 0.44
CIRBP-239ENST00000592467 OR5H1A6NKK0 313 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 EVPLLA8MZ36 301 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 HS3ST1O14792 307 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 TPST2O60704 377 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 MRPL33O75394 65 aaKnown RBP17.77■□□□□ 0.44
CIRBP-239ENST00000592467 NKX6-1P78426 367 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-239ENST00000592467 TIMM23BQ5SRD1 257 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 NET1Q7Z628 596 aaPredicted RBP17.77■□□□□ 0.44
CIRBP-239ENST00000592467 ZNF611Q8N823 705 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 OR52E4Q8NGH9 312 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 ZNF385AQ96PM9 386 aaKnown RBP17.77■□□□□ 0.44
CIRBP-239ENST00000592467 CCL19Q99731 98 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 SF3B5Q9BWJ5 86 aaKnown RBP17.77■□□□□ 0.44
CIRBP-239ENST00000592467 PRR14Q9BWN1 585 aa17.77■□□□□ 0.44
CIRBP-239ENST00000592467 AMBRA1Q9C0C7 1298 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms