RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PRKD3O94806 890 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 AHSA1O95433 338 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 GPIP06744 558 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 TNFRSF1BP20333 461 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 ASCL1P50553 236 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 C1orf140Q5VVS0 124 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 C5orf46Q6UWT4 87 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 DEF8Q6ZN54 512 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 RINLQ6ZS11 566 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 CBLL1Q75N03 491 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 FAM214BQ7L5A3 538 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 ADAMTS16Q8TE57 1224 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 ABHD3Q8WU67 409 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 SLC38A4Q969I6 547 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 TAPBPLQ9BX59 468 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 PCDHAC1Q9H158 963 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 KLHL9Q9P2J3 617 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 CD300AQ9UGN4 299 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 MAGEL2Q9UJ55 1249 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 RPS6KA6Q9UK32 745 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 MPDZO75970 2070 aa19.03■□□□□ 0.64
ATG4D-212ENST00000590096 TRAPPC13A5PLN9 417 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 SMAD9O15198 467 aaKnown RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 EIF1BO60739 113 aaKnown RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 SS18L1O75177 396 aaPredicted RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 UBOX5O94941 541 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 IMPDH2P12268 514 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 KIR2DL2P43627 348 aaPredicted RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 OR1E2P47887 323 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 CDH12P55289 794 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 CEACAM7Q14002 265 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 OR7A5Q15622 319 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 VWA1Q6PCB0 445 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 FKBP9P1Q75LS8 142 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 ARHGAP24Q8N264 748 aa19.02■□□□□ 0.64
ATG4D-212ENST00000590096 NAA11Q9BSU3 229 aaPredicted RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 POLR2J2Q9GZM3 115 aaKnown RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 POLR2J3Q9H1A7 115 aaKnown RBP19.02■□□□□ 0.64
ATG4D-212ENST00000590096 A0A087WUJ7 227 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 NBPF19A0A087WUL8 3843 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 CHP2O43745 196 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 SMNDC1O75940 238 aaKnown RBP eCLIP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 FPR1P21462 350 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 GRNP28799 593 aaKnown RBP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 TAS2R41P59536 307 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 RASGEF1BQ0VAM2 473 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 GUSBP1Q15486 140 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 TMEM201Q5SNT2 666 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 VTCN1Q7Z7D3 282 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 LSRQ86X29 649 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 OR6K3Q8NGY3 331 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 PIGXQ8TBF5 258 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 GEMIN6Q8WXD5 167 aaKnown RBP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 STARD4Q96DR4 205 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 HSH2DQ96JZ2 352 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 EPYCQ99645 322 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 TACO1Q9BSH4 297 aaKnown RBP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 C1orf21Q9H246 121 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 GP6Q9HCN6 339 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 KLHL13Q9P2N7 655 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 PROCRQ9UNN8 238 aa19.01■□□□□ 0.63
ATG4D-212ENST00000590096 SAMD4AQ9UPU9 718 aaKnown RBP19.01■□□□□ 0.63
ATG4D-212ENST00000590096 LIPT2A6NK58 231 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 CYTIPO60759 359 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 NPIPB7O75200 414 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 IFNW1P05000 195 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 GTF2E2P29084 291 aaKnown RBP19■□□□□ 0.63
ATG4D-212ENST00000590096 AGTR1P30556 359 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 IFNA8P32881 189 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 RPS5P46782 204 aaKnown RBP19■□□□□ 0.63
ATG4D-212ENST00000590096 EGR4Q05215 589 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 TFF3Q07654 80 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 FXNQ16595 210 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 IFI44LQ53G44 452 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 SP5Q6BEB4 398 aaPredicted RBP19■□□□□ 0.63
ATG4D-212ENST00000590096 PAQR6Q6TCH4 344 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 BTLAQ7Z6A9 289 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 LUZP2Q86TE4 346 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 GORASP2Q9H8Y8 452 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 JKAMPQ9P055 326 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 SLC7A7Q9UM01 511 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 SNX13Q9Y5W8 968 aa19■□□□□ 0.63
ATG4D-212ENST00000590096 TRAV36DV7A0A075B6V5 113 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 C19orf84I3L1E1 186 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 MSTNO14793 375 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 OR2T1O43869 369 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 YES1P07947 543 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 KLK2P20151 261 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 COL8A1P27658 744 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 UQCRC1P31930 480 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 MSX2P35548 267 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-212ENST00000590096 ABLIM2Q6H8Q1 611 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 TUSC5Q8IXB3 177 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 MFSD8Q8NHS3 518 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 SLC25A36Q96CQ1 311 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 KTI12Q96EK9 354 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-212ENST00000590096 SLC41A3Q96GZ6 507 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 MPP4Q96JB8 637 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 PSD2Q9BQI7 771 aa18.99■□□□□ 0.63
ATG4D-212ENST00000590096 TAS2R1Q9NYW7 299 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms