RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OPRM1P35372 400 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 POLR2IP36954 125 aaKnown RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 PIGAP37287 484 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 KCNJ5P48544 419 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 POLR2JP52435 117 aaKnown RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 VLDLRP98155 873 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TAP2Q03519 686 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 FAM27E3Q08E93 113 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 IL18R1Q13478 541 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 FAM53BQ14153 422 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SEMA3AQ14563 771 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SLC10A1Q14973 349 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 OXA1LQ15070 435 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TAF1AQ15573 450 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 PAGE3Q5JUK9 113 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 GPR107Q5VW38 600 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TTC23Q5W5X9 447 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 NSUN5P2Q63ZY6 315 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 LAIR2Q6ISS4 152 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF425Q6IV72 752 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TBPL2Q6SJ96 375 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SUSD1Q6UWL2 747 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF704Q6ZNC4 412 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SLC16A12Q6ZSM3 486 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ANKRD13BQ86YJ7 626 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 GCNT2Q8N0V5 402 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 CENPSQ8N2Z9 138 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 PARP8Q8N3A8 854 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SVOPLQ8N434 492 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF441Q8N8Z8 693 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 SNX31Q8N9S9 440 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 PLPP5Q8NEB5 264 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 NEIL3Q8TAT5 605 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 STAG3L4Q8TBR4 150 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TUBGCP3Q96CW5 907 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ZNF347Q96SE7 839 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MBOAT4Q96T53 435 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 FAM173AQ9BQD7 235 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MROQ9BYG7 248 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 NAA50Q9GZZ1 169 aaKnown RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 MAGIXQ9H6Y5 334 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 NLE1Q9NVX2 485 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-209ENST00000589941 HPF1Q9NWY4 346 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ENPP5Q9UJA9 477 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 AURKCQ9UQB9 309 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 FIS1Q9Y3D6 152 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ATG4BQ9Y4P1 393 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 PTGDR2Q9Y5Y4 395 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 RYR2Q92736 4967 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 ALPK2Q86TB3 2170 aa6.93□□□□□ -1.3
SMAD4-209ENST00000589941 TRBV5-3A0A0A0MS03 114 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OR51F1A6NGY5 319 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 VSTM5A8MXK1 200 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OVOL3O00110 214 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PPP6CO00743 305 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CD3EAPO15446 510 aaKnown RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OR1I1O60431 355 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 NOL3O60936 208 aaKnown RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 GABARAPO95166 117 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 BCL10O95999 233 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 SOD3P08294 240 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 HTR1AP08908 422 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CCDC159P0C7I6 412 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PPP3CBP16298 524 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PCMT1P22061 227 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PPP2R1BP30154 601 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CCR7P32248 378 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 RYKP34925 604 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 DIO3P55073 304 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CDH13P55290 713 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 BTG2P78543 158 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 HLXQ14774 488 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 C6orf136Q5SQH8 315 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 LIPNQ5VXI9 398 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PRSS48Q7RTY5 328 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CPNE9Q8IYJ1 553 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OFCC1Q8IZS5 231 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 SPARTQ8N0X7 666 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 NKAPQ8N5F7 415 aaKnown RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 C3orf56Q8N813 242 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 SEMA6DQ8NFY4 1073 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OR2T11Q8NH01 316 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CYGBQ8WWM9 190 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 ABTB1Q969K4 478 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 NRBF2Q96F24 287 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PDLIM5Q96HC4 596 aaKnown RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 TEX37Q96LM6 180 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 NSMCE2Q96MF7 247 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 RASL10BQ96S79 203 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CSF3RQ99062 836 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 C19orf43Q9BQ61 176 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 DCUN1D5Q9BTE7 237 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 MED18Q9BUE0 208 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 CHID1Q9BWS9 393 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 OSBPL10Q9BXB5 764 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
SMAD4-209ENST00000589941 GABARAPL1Q9H0R8 117 aa6.92□□□□□ -1.3
SMAD4-209ENST00000589941 INIPQ9NRY2 104 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms