RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 ZNF524Q96C55 264 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 SLC7A6OSQ96CW6 309 aaPredicted RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 GMPPAQ96IJ6 420 aaPredicted RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 OR5B2Q96R09 309 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 CGREF1Q99674 301 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 ZNF559Q9BR84 538 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 CPPED1Q9BRF8 314 aaPredicted RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 RBM24Q9BX46 236 aaKnown RBP9.28□□□□□ -0.92
SDF2-208ENST00000589788 BCL2L10Q9HD36 194 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 GLRX2Q9NS18 164 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 RLIMQ9NVW2 624 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 NDE1Q9NXR1 346 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 JKAMPQ9P055 326 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 EMC9Q9Y3B6 208 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 GMEB1Q9Y692 573 aa9.28□□□□□ -0.92
SDF2-208ENST00000589788 MSTNO14793 375 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 PGM3O95394 542 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ETS2P15036 469 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 SLC6A2P23975 617 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 FKBP2P26885 142 aaKnown RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 CPOXP36551 454 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 KIR2DL2P43627 348 aaPredicted RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 KIR2DL3P43628 341 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 NCALDP61601 193 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 COPZ1P61923 177 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 MXRA7P84157 204 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 SNTB1Q13884 538 aaKnown RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 ZNF239Q16600 458 aaKnown RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 CYP51A1Q16850 503 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 RUNDC3AQ59EK9 446 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ZNF311Q5JNZ3 666 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 RNF220Q5VTB9 566 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 VWA1Q6PCB0 445 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 RINLQ6ZS11 566 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ZNF771Q7L3S4 317 aaPredicted RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 FAM214BQ7L5A3 538 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ZNF550Q7Z398 422 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 RBM15BQ8NDT2 890 aaKnown RBP9.27□□□□□ -0.93
SDF2-208ENST00000589788 ROBO4Q8WZ75 1007 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 STARD4Q96DR4 205 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 C14orf79Q96F83 325 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ANKRD27Q96NW4 1050 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 SPATA5L1Q9BVQ7 753 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 SPATA9Q9BWV2 254 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 SRXN1Q9BYN0 137 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 LRMDAQ9H2I8 198 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 IKZF5Q9H5V7 419 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 CTPS2Q9NRF8 586 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 GID8Q9NWU2 228 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 GALNT8Q9NY28 637 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 TAS2R1Q9NYW7 299 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 CLEC4AQ9UMR7 237 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 PCDHB10Q9UN67 800 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 PROCRQ9UNN8 238 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 ANGPT4Q9Y264 503 aa9.27□□□□□ -0.93
SDF2-208ENST00000589788 NOTCH2Q04721 2471 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 TMED7-TICAM2A0A0A6YYA0 188 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 TUBAL3A6NHL2 446 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 A8MXE2 369 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 FXYD1O00168 92 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 SULT2B1O00204 365 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 FAAHO00519 579 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 GKN3PP0CG01 181 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 CCNA2P20248 432 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 ENPP1P22413 925 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 TACR3P29371 465 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 SLC1A3P43003 542 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 KCNJ5P48544 419 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 MTPNP58546 118 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 RAC3P60763 192 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 CSNK2A1P68400 391 aaPredicted RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 SORDQ00796 357 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 TLE4Q04727 773 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 EPS8Q12929 822 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 SCARB2Q14108 478 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 CAPRIN1Q14444 709 aaKnown RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 RNPS1Q15287 305 aaKnown RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 DNAL1Q4LDG9 190 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 SYT14P1Q58G82 188 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 C8orf82Q6P1X6 216 aaPredicted RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 C16orf89Q6UX73 402 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 FCRLAQ7L513 359 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 ZZZ3Q8IYH5 903 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 PGAM4Q8N0Y7 254 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 SLC43A2Q8N370 569 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 CLIP4Q8N3C7 705 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 CADM2Q8N3J6 435 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 C11orf65Q8NCR3 313 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 OR6K3Q8NGY3 331 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 RNF128Q8TEB7 428 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 LRRC58Q96CX6 371 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 ZHX1-C8orf76Q96EF9 292 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 ZNF607Q96SK3 696 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 HOPXQ9BPY8 73 aaPredicted RBP9.26□□□□□ -0.93
SDF2-208ENST00000589788 SLC39A3Q9BRY0 314 aa9.26□□□□□ -0.93
SDF2-208ENST00000589788 BTBD10Q9BSF8 475 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms