RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 OR11A1Q9GZK7 315 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 ZNF385DQ9H6B1 395 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 ASB6Q9NWX5 421 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
MBD1-220ENST00000589758 MAP1AP78559 2803 aaPredicted RBP12.68□□□□□ -0.38
MBD1-220ENST00000589758 CFAP73A6NFT4 308 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 AP3D1O14617 1153 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 ADAM11O75078 769 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 SOD3P08294 240 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 CCNA2P20248 432 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 TACR3P29371 465 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 IDUAP35475 653 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 IRX1P78414 480 aaPredicted RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 H3F3AP84243 136 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 MRPL2Q5T653 305 aaKnown RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 METTL21CQ5VZV1 264 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 GRIP2Q9C0E4 1043 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 PAIP1Q9H074 479 aaKnown RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 ALG2Q9H553 416 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 TPT1P8Q9HAU6 139 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 THUMPD1Q9NXG2 353 aaKnown RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 TAS2R16Q9NYV7 291 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 SLAMF8Q9P0V8 285 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 P2RX2Q9UBL9 471 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 OSGIN1Q9UJX0 560 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 MGAT4BQ9UQ53 548 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 PCDHB14Q9Y5E9 798 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
MBD1-220ENST00000589758 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
MBD1-220ENST00000589758 ROS1P08922 2347 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 A0A096LPI6 279 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 RAD51DO75771 328 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 IGHV3-9P01782 118 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 ZCCHC18P0CG32 403 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 PTAFRP25105 342 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 CRATP43155 626 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 GNGT1P63211 74 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 EPS8Q12929 822 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 ZSWIM7Q19AV6 140 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 LIN52Q52LA3 116 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 OR7E24Q6IFN5 339 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 KLHL17Q6TDP4 642 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 TMEM108Q6UXF1 575 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 ATG4DQ86TL0 474 aaPredicted RBP12.66□□□□□ -0.38
MBD1-220ENST00000589758 C10orf82Q8WW14 230 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 MUS81Q96NY9 551 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 ELAC2Q9BQ52 826 aaKnown RBP12.66□□□□□ -0.38
MBD1-220ENST00000589758 ADAM19Q9H013 955 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 MALT1Q9UDY8 824 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 SLC9A8Q9Y2E8 581 aa12.66□□□□□ -0.38
MBD1-220ENST00000589758 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 CLIC1O00299 241 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 ABCD4O14678 606 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 ANGPT2O15123 496 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 IMPDH2P12268 514 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 ETFAP13804 333 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 CXCR1P25024 350 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 LSP1P33241 339 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 NTF4P34130 210 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 CRISP3P54108 245 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 FAPQ12884 760 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 TNK1Q13470 666 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 PGGHGQ32M88 737 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 C1QTNF12Q5T7M4 302 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 CCDC103Q8IW40 242 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 OR52P1PQ8NH57 321 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 DNAJA3Q96EY1 480 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 TRAF4Q9BUZ4 470 aaPredicted RBP12.65□□□□□ -0.38
MBD1-220ENST00000589758 ARMC7Q9H6L4 198 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 CACYBPQ9HB71 228 aaKnown RBP12.65□□□□□ -0.38
MBD1-220ENST00000589758 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 TMEM45AQ9NWC5 275 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
MBD1-220ENST00000589758 LEF1Q9UJU2 399 aaPredicted RBP12.65□□□□□ -0.38
MBD1-220ENST00000589758 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
MBD1-220ENST00000589758 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 CDHR4A6H8M9 788 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 SHISA9B4DS77 424 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 RAMP1O60894 148 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 CDKN1AP38936 164 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 MVDP53602 400 aa12.64□□□□□ -0.39
MBD1-220ENST00000589758 CDH11P55287 796 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms