RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TMPPEQ6ZT21 453 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 NRMQ8IXM6 262 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 LINC00471Q8N535 108 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 TAAR8Q969N4 342 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 MIB2Q96AX9 1013 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 PTDSS2Q9BVG9 487 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 TAPBPLQ9BX59 468 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 COQ10BQ9H8M1 238 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 KRCC1Q9NPI7 259 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-211ENST00000589753 TRAPPC4Q9Y296 219 aa13.64□□□□□ -0.23
ATG4D-211ENST00000589753 KMT2BQ9UMN6 2715 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-211ENST00000589753 HTR3EA5X5Y0 456 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 B8ZZF3 427 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 IGF2P01344 180 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 IMPDH2P12268 514 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 IFI30P13284 250 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 IFNGR2P38484 337 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 EIF1AXP47813 144 aaKnown RBP13.63□□□□□ -0.23
ATG4D-211ENST00000589753 CARD18P57730 90 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-211ENST00000589753 LAPTM4AQ15012 233 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OR7A5Q15622 319 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 SGCBQ16585 318 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 GXYLT1Q4G148 440 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 CHMP1BQ7LBR1 199 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 PRICKLE2Q7Z3G6 844 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 TMEM179BQ7Z7N9 219 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 CDK20Q8IZL9 346 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 C10orf53Q8N6V4 93 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OR5M9Q8NGP3 310 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OR10D3Q8NH80 312 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OR5K1Q8NHB7 308 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 MFSD8Q8NHS3 518 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 FAM57AQ8TBR7 257 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 OSTF1Q92882 214 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 SLC25A36Q96CQ1 311 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 TIGARQ9NQ88 270 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 PNPLA3Q9NST1 481 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 C20orf141Q9NUB4 165 aa13.63□□□□□ -0.23
ATG4D-211ENST00000589753 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-211ENST00000589753 LIPT2A6NK58 231 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 EIF4E1BA6NMX2 242 aaKnown RBP13.62□□□□□ -0.23
ATG4D-211ENST00000589753 FTCDNL1E5RQL4 147 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 CXCL13O43927 109 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 CH25HO95992 272 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 BGLAPP02818 100 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 TPOP07202 933 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ANPEPP15144 967 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF23P17027 643 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 CTBP2P56545 445 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 OR2B6P58173 313 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 RAC3P60763 192 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 SLC35A1P78382 337 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF74Q16587 644 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 SHQ1Q6PI26 577 aaKnown RBP13.62□□□□□ -0.23
ATG4D-211ENST00000589753 CD163Q86VB7 1156 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ZNF843Q8N446 348 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 OR10G2Q8NGC3 310 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ZPLD1Q8TCW7 415 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 GIPC3Q8TF64 312 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 NRBF2Q96F24 287 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 PDP1Q9P0J1 537 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-211ENST00000589753 C6orf203Q9P0P8 240 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-211ENST00000589753 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
ATG4D-211ENST00000589753 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
ATG4D-211ENST00000589753 ARRDC5A6NEK1 342 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 AHRRA9YTQ3 701 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 G3V2T6 193 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 PRRG2O14669 202 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 DNPH1O43598 174 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 MGRN1O60291 552 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 SLC19A2O60779 497 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 OR7A10O76100 309 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 CBLP22681 906 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 GTF2E2P29084 291 aaKnown RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 OMPP47874 163 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 LTBQ06643 244 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 MFSD13AQ14CX5 517 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 SF3B4Q15427 424 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■■■□ 20.4
ATG4D-211ENST00000589753 ZNF585AQ6P3V2 769 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 TMPRSS11FQ6ZWK6 438 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 SLC46A3Q7Z3Q1 461 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 MEX3DQ86XN8 651 aaKnown RBP13.61□□□□□ -0.23
ATG4D-211ENST00000589753 HIPK1Q86Z02 1210 aa13.61□□□□□ -0.23
ATG4D-211ENST00000589753 ZDHHC13Q8IUH4 622 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms