RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ATPIF1	Q9UII2	106 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ELF5	Q9UKW6	265 aa	Predicted RBP	14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC7A7	Q9UM01	511 aa		14.12	□□□□□ -0.15
DDX39A-209	ENST00000589318	ALOX12B	O75342	701 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	RFPL3	O75679	317 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	IL33	O95760	270 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	HEXB	P07686	556 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	IGFBP1	P08833	259 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	CFL1	P23528	166 aa	Known RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	PTBP1	P26599	531 aa	Known RBP eCLIP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ILK	Q13418	452 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR1Q1	Q15612	314 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	DECR1	Q16698	335 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	KLHL26	Q53HC5	615 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	LCN1P1	Q5VSP4	162 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF441	Q8N8Z8	693 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	NFAM1	Q8NET5	270 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	GPR137	Q96N19	417 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	TM9SF2	Q99805	663 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	NRSN2	Q9GZP1	204 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	WWTR1	Q9GZV5	400 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	EVA1A	Q9H8M9	152 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ENOPH1	Q9UHY7	261 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF223	Q9UK11	482 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	HSPB11	Q9Y547	144 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	C2orf92	A0A1B0GVN3	265 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	TRAPPC13	A5PLN9	417 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	MPZL2	O60487	215 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	SOX14	O95416	240 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	HLA-DQB1	P01920	261 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	PRKACA	P17612	351 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	GABRB1	P18505	474 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	NUBP1	P53384	320 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	PSMD4	P55036	377 aa	Known RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	DCAF7	P61962	342 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	FNDC7	Q5VTL7	733 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	HSDL2	Q6YN16	418 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	WDR88	Q6ZMY6	472 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	PRICKLE2	Q7Z3G6	844 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ATCAY	Q86WG3	371 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	APCDD1L	Q8NCL9	501 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	TMEM255B	Q8WV15	326 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ACOT11	Q8WXI4	607 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	GAL3ST4	Q96RP7	486 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	WDR77	Q9BQA1	342 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	EDEM2	Q9BV94	578 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ASPN	Q9BXN1	380 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	SEMA4C	Q9C0C4	833 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	C11orf54	Q9H0W9	315 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	COPS7A	Q9UBW8	275 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	SEC14L4	Q9UDX3	406 aa		14.11	□□□□□ -0.15
DDX39A-209	ENST00000589318	EXPH5	Q8NEV8	1989 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR6C76	A6NM76	312 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	T	O15178	435 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	SLC43A1	O75387	559 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	OMP	P47874	163 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	EMP2	P54851	167 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	RRAS2	P62070	204 aa	Predicted RBP	14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	COX10	Q12887	443 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	KLHL12	Q53G59	568 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	LAMTOR1	Q6IAA8	161 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF730	Q6ZMV8	503 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	MEX3D	Q86XN8	651 aa	Known RBP	14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	CMIP	Q8IY22	773 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	LRFN5	Q96NI6	719 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	MGLL	Q99685	303 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	TAPBPL	Q9BX59	468 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZC4H2	Q9NQZ6	224 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	ZNF226	Q9NYT6	803 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	PPIE	Q9UNP9	301 aa	Known RBP	14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	OTOGL	Q3ZCN5	2332 aa		14.1	□□□□□ -0.15
DDX39A-209	ENST00000589318	CDC14C	A4D256	554 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	SERINC4	A6NH21	518 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	TUBAL3	A6NHL2	446 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318		B4E171	279 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	MYL12B	O14950	172 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	KLF4	O43474	513 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ORC5	O43913	435 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PTH	P01270	115 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ATF4	P18848	351 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	MYL12A	P19105	171 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	TSPAN7	P41732	249 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	MAP2K3	P46734	347 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	PER3	P56645	1201 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	B2M	P61769	119 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	ALDH6A1	Q02252	535 aa	Known RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	TATDN3	Q17R31	274 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	NDUFAF6	Q330K2	333 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	FAM199X	Q6PEV8	388 aa	Predicted RBP	14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	TMEM205	Q6UW68	189 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	FAM198B	Q6UWH4	519 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	FAM131A	Q6UXB0	335 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	APOOL	Q6UXV4	268 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	CDH24	Q86UP0	819 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	POGLUT1	Q8NBL1	392 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	FAM71C	Q8NEG0	241 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	OR8H1	Q8NGG4	311 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	CCDC120	Q96HB5	630 aa		14.09	□□□□□ -0.15
DDX39A-209	ENST00000589318	RNF167	Q9H6Y7	350 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms