RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 OR5L2Q8NGL0 311 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 B4GALNT2Q8NHY0 566 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 TBC1D15Q8TC07 691 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 NACC2Q96BF6 587 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 LRFN5Q96NI6 719 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 OPALINQ96PE5 141 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 ERMAPQ96PL5 475 aaPredicted RBP7.99□□□□□ -1.13
SMAD4-206ENST00000588860 STRADBQ9C0K7 418 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 FN3KQ9H479 309 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 AKIRIN1Q9H9L7 192 aaPredicted RBP7.99□□□□□ -1.13
SMAD4-206ENST00000588860 CMC2Q9NRP2 79 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 PTRH2Q9Y3E5 179 aaKnown RBP7.99□□□□□ -1.13
SMAD4-206ENST00000588860 LOXL2Q9Y4K0 774 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 ZZEF1O43149 2961 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 KIAA1549Q9HCM3 1950 aa7.99□□□□□ -1.13
SMAD4-206ENST00000588860 TEX51A0A1B0GUA7 166 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZC3H12DA2A288 527 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 HTR3EA5X5Y0 456 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CCDC182A6NF36 153 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 MCIDASD6RGH6 385 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PRR23D1E9PI22 279 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CCRL2O00421 344 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CDC40O60508 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 FOXD2O60548 495 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CLPXO76031 633 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZFAND5O76080 213 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SCG5P05408 212 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PRR23D2P0DMB1 279 aaPredicted RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CD59P13987 128 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZNF3P17036 446 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PGCP20142 388 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PAICSP22234 425 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 MST1P26927 711 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 NOS3P29474 1203 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ATP6V1E1P36543 226 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 RPL4P36578 427 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SOX3P41225 446 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SLC1A3P43003 542 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 RPS7P62081 194 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ITGADQ13349 1161 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 FHL1Q13642 323 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PCOLCEQ15113 449 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 QPRTQ15274 297 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SSX1Q16384 188 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 GXYLT1Q4G148 440 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 KLHL12Q53G59 568 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 POMZP3Q6PJE2 187 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 DPY19L2P2Q6ZN68 376 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ADCK1Q86TW2 530 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 MISPQ8IVT2 679 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 FAM98AQ8NCA5 519 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 KBTBD8Q8NFY9 601 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 OR4F15Q8NGB8 312 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 OR9Q1Q8NGQ5 310 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 OR8K3Q8NH51 312 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 OR5W2Q8NH69 310 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SLC22A8Q8TCC7 542 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 HGDQ93099 445 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZNF524Q96C55 264 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ZHX1-C8orf76Q96EF9 292 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CMKLR1Q99788 373 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 CHCHD6Q9BRQ6 235 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 NDEL1Q9GZM8 345 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 ADAM19Q9H013 955 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 OR51E2Q9H255 320 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 C12orf10Q9HB07 376 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 TNFRSF10DQ9UBN6 386 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 KLHL21Q9UJP4 597 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 EXOGQ9Y2C4 368 aaKnown RBP7.98□□□□□ -1.13
SMAD4-206ENST00000588860 PCDHGA3Q9Y5H0 932 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 IER3IP1Q9Y5U9 82 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 SPEGQ15772 3267 aa7.98□□□□□ -1.13
SMAD4-206ENST00000588860 FRYQ5TBA9 3013 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 DOCK10Q96BY6 2186 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 CNOT1A5YKK6 2376 aaKnown RBP7.97□□□□□ -1.13
SMAD4-206ENST00000588860 LOC102723996A0A087X1L8 192 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 TMEM129A0AVI4 362 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 TMEM200CA6NKL6 621 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 ZNF354AO60765 605 aaPredicted RBP7.97□□□□□ -1.13
SMAD4-206ENST00000588860 SLC25A12O75746 678 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 IGF2P01344 180 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 UMODP07911 640 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 LIMS3P0CW19 117 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 LIMS4P0CW20 117 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 CDK4P11802 303 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 PEPDP12955 493 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 CXCR1P25024 350 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 UGT2B10P36537 528 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 CD79BP40259 229 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 FOLR3P41439 243 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 SERPINB10P48595 397 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 MMP16P51512 607 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 P2RX1P51575 399 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 POLR2HP52434 150 aaKnown RBP7.97□□□□□ -1.13
SMAD4-206ENST00000588860 SLC16A1P53985 500 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 WNT4P56705 351 aa7.97□□□□□ -1.13
SMAD4-206ENST00000588860 MLLT11Q13015 90 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms