RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 OR51Q1Q8NH59 317 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 LGALS14Q8TCE9 139 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 CNOT9Q92600 299 aaKnown RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 NSMAFQ92636 917 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 SLITRK2Q9H156 845 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 DNAJB12Q9NXW2 375 aaKnown RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 FLRT3Q9NZU0 649 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 USP36Q9P275 1121 aaKnown RBP17.09■□□□□ 0.33
DDX39A-206ENST00000587730 NCDNQ9UBB6 729 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 ETV7Q9Y603 341 aa17.09■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3DA0A087WVF3 549 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3IA0A087WXS9 549 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3LB9A6J9 549 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 KRT33AO76009 404 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 IGF2P01344 180 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 PDGFAP04085 211 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TACSTD2P09758 323 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3HP0C7X1 549 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 SRMP19623 302 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 CXCL3P19876 107 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 RPS11P62280 158 aaKnown RBP eCLIP17.08■□□□□ 0.33
DDX39A-206ENST00000587730 CRYZQ08257 329 aaKnown RBP17.08■□□□□ 0.33
DDX39A-206ENST00000587730 GRK1Q15835 563 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 PRRT3Q5FWE3 981 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 FCRLBQ6BAA4 426 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3CQ6IPX1 549 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 SSX6Q7RTT6 188 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 TBC1D3Q8IZP1 549 aaPredicted RBP17.08■□□□□ 0.33
DDX39A-206ENST00000587730 SPICQ8N5J4 248 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 FCAMRQ8WWV6 532 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 OIT3Q8WWZ8 545 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 ZMYND19Q96E35 227 aaPredicted RBP17.08■□□□□ 0.33
DDX39A-206ENST00000587730 GPN1Q9HCN4 374 aaPredicted RBP17.08■□□□□ 0.33
DDX39A-206ENST00000587730 FBXO34Q9NWN3 711 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 GNG8Q9UK08 70 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 FBXL3Q9UKT7 428 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 ZNF281Q9Y2X9 895 aa17.08■□□□□ 0.33
DDX39A-206ENST00000587730 BLACEA4D250 179 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 IFITM5A6NNB3 132 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 C2orf74A8MZ97 194 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 GALR3O60755 368 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 TFP02787 698 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 MT-ND4P03905 459 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 CPN1P15169 458 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ACAA2P42765 397 aaKnown RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ZNF81P51508 661 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 CCR6P51684 374 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 RAB38P57729 211 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 PRPS1P60891 318 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 FHL1Q13642 323 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ZNF141Q15928 474 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ITPRIPL2Q3MIP1 535 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 TOR2AQ5JU69 321 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 OLFML2AQ68BL7 652 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 RNF44Q7L0R7 432 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ZNF440Q8IYI8 595 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 DTX3Q8N9I9 347 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 OR1E3Q8WZA6 343 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 S100A16Q96FQ6 103 aaKnown RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 G6PC3Q9BUM1 346 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 DZANK1Q9NVP4 752 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 MAB21L2Q9Y586 359 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 NPIPA5A0A0B4J1W7 369 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 NPIPA7E9PJI5 369 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 H0YGG7 62 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 NPIPA8P0DM63 369 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 HIST1H1CP16403 213 aaKnown RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ARF3P61204 181 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 TMEM240Q5SV17 173 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 LRRN1Q6UXK5 716 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 LINGO2Q7L985 606 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 CMTM4Q8IZR5 234 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 UXS1Q8NBZ7 420 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 OR11H4Q8NGC9 324 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 OR13C5Q8NGS8 318 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 THRSPQ92748 146 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 OR14A2Q96R54 314 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 GPX7Q96SL4 187 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 UTP23Q9BRU9 249 aaKnown RBP17.07■□□□□ 0.32
DDX39A-206ENST00000587730 KCNN3Q9UGI6 736 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 ZNF337Q9Y3M9 751 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 IER3IP1Q9Y5U9 82 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 FKBP7Q9Y680 259 aa17.07■□□□□ 0.32
DDX39A-206ENST00000587730 A6NCN8 305 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 OR10H2O60403 315 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 LDB3O75112 727 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 WNT1P04628 370 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 GYPBP06028 91 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 ACTR1BP42025 376 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 ACTR1AP61163 376 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 SKP1P63208 163 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 DHODHQ02127 395 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 ID2Q02363 134 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 ENPP7Q6UWV6 458 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 SEZ6L2Q6UXD5 910 aa17.06■□□□□ 0.32
DDX39A-206ENST00000587730 ZNF687Q8N1G0 1237 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms