RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 IFI30P13284 250 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 OSMP13725 252 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 POU2F1P14859 743 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 IL11P20809 199 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 FKBP2P26885 142 aaKnown RBP13.47□□□□□ -0.25
NFIX-208ENST00000587260 ESRRGP62508 458 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 ALDH6A1Q02252 535 aaKnown RBP13.47□□□□□ -0.25
NFIX-208ENST00000587260 KLRB1Q12918 225 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 NPRL3Q12980 569 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 SLC36A3Q495N2 470 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
NFIX-208ENST00000587260 FAM180AQ6UWF9 173 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 RASSF6Q6ZTQ3 369 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 GALNT5Q7Z7M9 940 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 ATP6V1C2Q8NEY4 427 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 FAM46AQ96IP4 442 aaKnown RBP13.47□□□□□ -0.25
NFIX-208ENST00000587260 SFXN2Q96NB2 322 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 GRIP2Q9C0E4 1043 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 TMEM185BQ9H7F4 350 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 FAM118AQ9NWS6 357 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 SLC6A5Q9Y345 797 aa13.47□□□□□ -0.25
NFIX-208ENST00000587260 TMEM72A0PK05 275 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 OR2M5A3KFT3 312 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 H3BML4 177 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 EFNA2O43921 213 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 SUSD5O60279 629 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 TP53P04637 393 aaPredicted RBP13.46□□□□□ -0.25
NFIX-208ENST00000587260 PEPDP12955 493 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 ACADSP16219 412 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 ZNF17P17021 662 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 ZIK1Q3SY52 487 aaPredicted RBP13.46□□□□□ -0.25
NFIX-208ENST00000587260 PRR30Q53SZ7 412 aaPredicted RBP13.46□□□□□ -0.25
NFIX-208ENST00000587260 CMPK2Q5EBM0 449 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 WLSQ5T9L3 541 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 TTC23Q5W5X9 447 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 OR6S1Q8NH40 331 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 SMPDL3BQ92485 455 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 DNAJA3Q96EY1 480 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 CHRNA9Q9UGM1 479 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 MPDZO75970 2070 aa13.46□□□□□ -0.25
NFIX-208ENST00000587260 ENO4A6NNW6 628 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 NPIPA5E9PKD4 350 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 KPNA4O00629 521 aaPredicted RBP13.45□□□□□ -0.26
NFIX-208ENST00000587260 CDC42EP2O14613 210 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 OPN1LWP04000 364 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 MAKP20794 623 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 ELK4P28324 431 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 POLR2IP36954 125 aaKnown RBP13.45□□□□□ -0.26
NFIX-208ENST00000587260 CAPGP40121 348 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 CLK1P49759 484 aaKnown RBP13.45□□□□□ -0.26
NFIX-208ENST00000587260 B3GALT5-AS1P59052 145 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
NFIX-208ENST00000587260 USP51Q70EK9 711 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 P3H2Q8IVL5 708 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 CISD2Q8N5K1 135 aaKnown RBP13.45□□□□□ -0.26
NFIX-208ENST00000587260 SGTBQ96EQ0 304 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 PIGQQ9BRB3 760 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 POTEKPQ9BYX7 375 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 ANKRD60Q9BZ19 345 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 Q9H521 79 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 LDAHQ9H6V9 325 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 EXO5Q9H790 373 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 QPCTLQ9NXS2 382 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 IL20Q9NYY1 176 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 NPIPA1Q9UND3 350 aa13.45□□□□□ -0.26
NFIX-208ENST00000587260 TRAV36DV7A0A075B6V5 113 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 LOC100130705A0A1B0GUX0 176 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 FZD7O75084 574 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 PTP4A3O75365 173 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 WISP2O76076 250 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 CRYABP02511 175 aaKnown RBP13.44□□□□□ -0.26
NFIX-208ENST00000587260 GPR4P46093 362 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 SLC9A3P48764 834 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 CRISP1P54107 249 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 IL1RL1Q01638 556 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 SELENBP1Q13228 472 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 IL18R1Q13478 541 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 KEAP1Q14145 624 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 ZNF74Q16587 644 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.44□□□□□ -0.26
NFIX-208ENST00000587260 C6orf52Q5T4I8 152 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 TRILQ7L0X0 811 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 ZNF555Q8NEP9 628 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
NFIX-208ENST00000587260 KTI12Q96EK9 354 aaPredicted RBP13.44□□□□□ -0.26
NFIX-208ENST00000587260 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 PITX2Q99697 317 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 RIBC2Q9H4K1 309 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 TNFRSF10DQ9UBN6 386 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 NDRG4Q9ULP0 352 aaKnown RBP13.44□□□□□ -0.26
NFIX-208ENST00000587260 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
NFIX-208ENST00000587260 MED12Q93074 2177 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 ATRXP46100 2492 aa13.44□□□□□ -0.26
NFIX-208ENST00000587260 TLN1Q9Y490 2541 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms