RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CD300LDQ6UXZ3 194 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 B3GNT6Q6ZMB0 384 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 SEM1Q6ZVN7 128 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 PLEKHM3Q6ZWE6 761 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 TRILQ7L0X0 811 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ZNF550Q7Z398 422 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 GALNT5Q7Z7M9 940 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 CDC20BQ86Y33 519 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 GRAMD2AQ8IUY3 354 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 P3H2Q8IVL5 708 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ZNF440Q8IYI8 595 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 HS3ST5Q8IZT8 346 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 AQP11Q8NBQ7 271 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 NAXEQ8NCW5 288 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 C17orf47Q8NEP4 570 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ADAMTS16Q8TE57 1224 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 FBLIM1Q8WUP2 373 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 IPCEF1Q8WWN9 437 aaPredicted RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 ASB15Q8WXK1 588 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 VSTM2LQ96N03 204 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 RASL10BQ96S79 203 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 TUBA1CQ9BQE3 449 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 OR10A5Q9H207 317 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ZDHHC11Q9H8X9 412 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 HHATLQ9HCP6 504 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 IMPAD1Q9NX62 359 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 SPRR3Q9UBC9 169 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 SLC35A3Q9Y2D2 325 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 OR10H1Q9Y4A9 318 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 MAGED1Q9Y5V3 778 aaPredicted RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 SNX5Q9Y5X3 404 aa7.1□□□□□ -1.27
VMP1-204ENST00000587259 PHF3Q92576 2039 aaKnown RBP7.1□□□□□ -1.27
VMP1-204ENST00000587259 A0A1W2PS29 197 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SH3PXD2BA1X283 911 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SH3D21A4FU49 640 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 HTR3EA5X5Y0 456 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 CDHR4A6H8M9 788 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 DPPA5A6NC42 116 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TRIM64CA6NLI5 447 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SNTNA6NMZ2 147 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 M0R3H8 397 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 NOL3O60936 208 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 GLSO94925 669 aaPredicted RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 KCNK2O95069 426 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ANGPTL1O95841 491 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 CT62P0C5K7 136 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 OSMP13725 252 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TNFRSF1BP20333 461 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 PRKACGP22612 351 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 EEF1B2P24534 225 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 KRT20P35900 424 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 GGT2P36268 569 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 KIR2DL3P43628 341 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 EMDP50402 254 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 EEF1A1P68104 462 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 PSG6Q00889 435 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 MVKQ03426 396 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 LTBQ06643 244 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 FOXO1Q12778 655 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ZNF267Q14586 743 aaPredicted RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 EXOSC7Q15024 291 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 GPR68Q15743 365 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 DECR1Q16698 335 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TMEM44Q2T9K0 475 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 C6orf141Q5SZD1 244 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 PRAMEF20Q5VT98 475 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 RPL13AP3Q6NVV1 102 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ZNF613Q6PF04 617 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ZNF773Q6PK81 442 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ZNF836Q6ZNA1 936 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SLC29A4Q7RTT9 530 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TSEN54Q7Z6J9 526 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 ALDH16A1Q8IZ83 802 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 RNF113BQ8IZP6 322 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 LINC00528Q8N1L1 170 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SLC43A2Q8N370 569 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 RELL2Q8NC24 303 aaPredicted RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 OR6T1Q8NGN1 323 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 OR52J3Q8NH60 311 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 PIGXQ8TBF5 258 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TRUB1Q8WWH5 349 aaKnown RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 ACOT11Q8WXI4 607 aaPredicted RBP7.09□□□□□ -1.27
VMP1-204ENST00000587259 VMP1Q96GC9 406 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 Q96MT0 163 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 OR8D2Q9GZM6 311 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SLC6A15Q9H2J7 730 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 EXO5Q9H790 373 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 RASSF1Q9NS23 344 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 SELENONQ9NZV5 590 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 MKLN1Q9UL63 735 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 CBLCQ9ULV8 474 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 A4GNTQ9UNA3 340 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 ERVK-19Q9WJR5 959 aa7.09□□□□□ -1.27
VMP1-204ENST00000587259 TMEM5Q9Y2B1 443 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms