RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 GID8Q9NWU2 228 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 SELENONQ9NZV5 590 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 NOSIPQ9Y314 301 aaKnown RBP18.31■□□□□ 0.52
CIRBP-209ENST00000586555 NIPBLQ6KC79 2804 aaeCLIP18.31■□□□□ 0.52
CIRBP-209ENST00000586555 IGKV3D-15A0A087WSY6 115 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 FBP2O00757 339 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 CCDC22O60826 627 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 CNOT4O95628 575 aaKnown RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 HRGP04196 525 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 CRYGSP22914 178 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 AQP1P29972 269 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 CAPRIN1Q14444 709 aaKnown RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ANKRD34AQ69YU3 496 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 NANOGP8Q6NSW7 305 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 PAQR6Q6TCH4 344 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 PAMR1Q6UXH9 720 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 PATL1Q86TB9 770 aaKnown RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 LSMEM1Q8N8F7 131 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 DNAJA4Q8WW22 397 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 C3orf49Q96BT1 292 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 LRRC58Q96CX6 371 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ZC3HAV1LQ96H79 300 aaKnown RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ZNF317Q96PQ6 595 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ZNF300Q96RE9 604 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ECSITQ9BQ95 431 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 NANOGQ9H9S0 305 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 C12orf10Q9HB07 376 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 PARPBPQ9NWS1 579 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 ING1Q9UK53 422 aaPredicted RBP18.3■□□□□ 0.52
CIRBP-209ENST00000586555 CAPN7Q9Y6W3 813 aa18.3■□□□□ 0.52
CIRBP-209ENST00000586555 LOC100653049A0A140TA62 436 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ELOA3DA6NLF2 546 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 MRASO14807 208 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 FRS3O43559 492 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 KRT34O76011 436 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 IMPDH2P12268 514 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 KLK2P20151 261 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 IL32P24001 234 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 CCKARP32238 428 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 SLC16A1P53985 500 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 RGS8P57771 180 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 H3F3AP84243 136 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ITGADQ13349 1161 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 CEACAM7Q14002 265 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ELOA3BQ3SY89 546 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 SFRP5Q5T4F7 317 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 Q6ZT83 130 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 NET1Q7Z628 596 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 RANBP3LQ86VV4 465 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 CXorf67Q86X51 503 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 PTOV1Q86YD1 416 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 GABRG1Q8N1C3 465 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ELOA3Q8NG57 546 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 OR8J3Q8NGG0 315 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 OR52E4Q8NGH9 312 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 OR10A6Q8NH74 314 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 STK35Q8TDR2 534 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 SLC26A7Q8TE54 656 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 KISS1RQ969F8 398 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ZNF775Q96BV0 537 aaPredicted RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ACTR6Q9GZN1 396 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 TMEM27Q9HBJ8 222 aa18.29■□□□□ 0.52
CIRBP-209ENST00000586555 TESQ9UGI8 421 aaKnown RBP18.29■□□□□ 0.52
CIRBP-209ENST00000586555 ARID1AO14497 2285 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ZC3H12DA2A288 527 aaKnown RBP18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ZNF716A6NP11 495 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 MRPL33O75394 65 aaKnown RBP18.28■□□□□ 0.52
CIRBP-209ENST00000586555 MFN2O95140 757 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ATE1O95260 518 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 AHSA1O95433 338 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ADAP00813 363 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 C8BP07358 591 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 PNMTP11086 282 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 HOXC5Q00444 222 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 BNIP2Q12982 314 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 SELPLGQ14242 412 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 POU4F3Q15319 338 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 OR7A5Q15622 319 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 KRTAP21-3Q3LHN1 58 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 OTUD3Q5T2D3 398 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-209ENST00000586555 C1orf140Q5VVS0 124 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 REP15Q6BDI9 236 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 TMEM225Q6GV28 225 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ULK3Q6PHR2 472 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 C5orf46Q6UWT4 87 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 ATG4DQ86TL0 474 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-209ENST00000586555 SNX32Q86XE0 403 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 CCDC103Q8IW40 242 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 RASSF5Q8WWW0 418 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 APH1AQ96BI3 265 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 PIK3IP1Q96FE7 263 aa18.28■□□□□ 0.52
CIRBP-209ENST00000586555 C6orf203Q9P0P8 240 aaPredicted RBP18.28■□□□□ 0.52
CIRBP-209ENST00000586555 LIPT2A6NK58 231 aa18.27■□□□□ 0.52
CIRBP-209ENST00000586555 M0QX08 132 aa18.27■□□□□ 0.52
CIRBP-209ENST00000586555 TPST1O60507 370 aa18.27■□□□□ 0.52
CIRBP-209ENST00000586555 GCM2O75603 506 aaPredicted RBP18.27■□□□□ 0.52
CIRBP-209ENST00000586555 GTF2E2P29084 291 aaKnown RBP18.27■□□□□ 0.52
CIRBP-209ENST00000586555 PCGF2P35227 344 aa18.27■□□□□ 0.52
CIRBP-209ENST00000586555 PCBP3P57721 371 aaKnown RBP18.27■□□□□ 0.52
CIRBP-209ENST00000586555 FAM91A1Q658Y4 838 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms