RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NDUFAF7Q7L592 441 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 MARCH3Q86UD3 253 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 ANKRD13BQ86YJ7 626 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 GID4Q8IVV7 300 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 ESX1Q8N693 406 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 IQCF1Q8N6M8 205 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 ANKK1Q8NFD2 765 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 OR8D4Q8NGM9 314 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 PFN4Q8NHR9 129 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 RNF138Q8WVD3 245 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 SGCDQ92629 289 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 HGDQ93099 445 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 ISOC1Q96CN7 298 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 LRR1Q96L50 414 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 SECISBP2Q96T21 854 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 GPR87Q9BY21 358 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 PLA2G12AQ9BZM1 189 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 AKIRIN1Q9H9L7 192 aaPredicted RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 ATP13A2Q9NQ11 1180 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 C20orf141Q9NUB4 165 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 CHCHD3Q9NX63 227 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 GPR83Q9NYM4 423 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 FARSAQ9Y285 508 aaKnown RBP9.47□□□□□ -0.89
LIG3-203ENST00000585370 FER1L5A0AVI2 2057 aa9.47□□□□□ -0.89
LIG3-203ENST00000585370 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 ENO4A6NNW6 628 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 STMND1H3BQB6 276 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 BHLHE40O14503 412 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 PRKNO60260 465 aaPredicted RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 MAN1A2O60476 641 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 OR7A10O76100 309 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 NDUFB2O95178 105 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 STSP08842 583 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 PEPDP12955 493 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 FUT1P19526 365 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 PAICSP22234 425 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 RNF144AP50876 292 aaPredicted RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 POLR2HP52434 150 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 DLX5P56178 289 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 ZNF117Q03924 483 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.46□□□□□ -0.9
LIG3-203ENST00000585370 SNTA1Q13424 505 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 BTBD16Q32M84 506 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 NDUFAF6Q330K2 333 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 GPR107Q5VW38 600 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 NXNL2Q5VZ03 156 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 SLC30A6Q6NXT4 461 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 TMEM81Q6P7N7 255 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 DPY19L2P2Q6ZN68 376 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 ZNF367Q7RTV3 350 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 GATSQ8NAP1 163 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 OR4Q3Q8NH05 313 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 OR6S1Q8NH40 331 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 GPR119Q8TDV5 335 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 ST8SIA1Q92185 356 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 NKD1Q969G9 470 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 C8orf44Q96CB5 159 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 NMD3Q96D46 503 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 MYCBPQ99417 103 aaPredicted RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 IFT27Q9BW83 186 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 GPN2Q9H9Y4 310 aaPredicted RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 AMBNQ9NP70 447 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 FGF20Q9NP95 211 aaPredicted RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 CMC2Q9NRP2 79 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 DNAJC27Q9NZQ0 273 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 WARS2Q9UGM6 360 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 KLHL21Q9UJP4 597 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 DIMT1Q9UNQ2 313 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 YARS2Q9Y2Z4 477 aaKnown RBP9.46□□□□□ -0.9
LIG3-203ENST00000585370 SLC6A5Q9Y345 797 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 HS3ST3B1Q9Y662 390 aa9.46□□□□□ -0.9
LIG3-203ENST00000585370 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 NSG1A0A0A6YYJ2 146 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 ANKUB1A6NFN9 424 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 TRIM64BA6NI03 449 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 RIIAD1A6NNX1 92 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 C21orf140B9A014 251 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 WWP2O00308 870 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 KPNA4O00629 521 aaPredicted RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 IMPA2O14732 288 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 ARPC3O15145 178 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 OIP5O43482 229 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 INMTO95050 263 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 NTN1O95631 604 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 RAB36O95755 333 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 NUDT14O95848 222 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 FADS2O95864 444 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 MT-ATP6P00846 226 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 HIST1H2ABP04908 130 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 COX6A1P12074 109 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 APEHP13798 732 aaKnown RBP9.45□□□□□ -0.9
LIG3-203ENST00000585370 TCN2P20062 427 aa9.45□□□□□ -0.9
LIG3-203ENST00000585370 PSMB9P28065 219 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms