RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CGREF1Q99674 301 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 UBTD1Q9HAC8 227 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 RPS6KB2Q9UBS0 482 aa18.09■□□□□ 0.49
SS18-224ENST00000584083 HIVEP1P15822 2718 aa18.08■□□□□ 0.49
SS18-224ENST00000584083 A8MVM7 634 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 SERPINB7O75635 380 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 LYZL6O75951 148 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 IGHV3-9P01782 118 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 SLC16A1P53985 500 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 MTPNP58546 118 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 GUCY1A3Q02108 690 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 CAPRIN1Q14444 709 aaKnown RBP18.08■□□□□ 0.48
SS18-224ENST00000584083 ADRM1Q16186 407 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 DEFB113Q30KQ7 82 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 OTUD3Q5T2D3 398 aaPredicted RBP18.08■□□□□ 0.48
SS18-224ENST00000584083 PAQR6Q6TCH4 344 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 HIPK4Q8NE63 616 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 C3orf49Q96BT1 292 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 PLPPR2Q96GM1 343 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 USB1Q9BQ65 265 aaKnown RBP18.08■□□□□ 0.48
SS18-224ENST00000584083 TAPBPLQ9BX59 468 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 CXXC4Q9H2H0 198 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 SLC13A4Q9UKG4 626 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 ANGPT4Q9Y264 503 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 DSCAMO60469 2012 aa18.08■□□□□ 0.48
SS18-224ENST00000584083 PRORSD1PA6NEY8 169 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 LIPT2A6NK58 231 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 TPST1O60507 370 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 MRPL33O75394 65 aaKnown RBP18.07■□□□□ 0.48
SS18-224ENST00000584083 AKR7A3O95154 331 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 CNOT4O95628 575 aaKnown RBP18.07■□□□□ 0.48
SS18-224ENST00000584083 CD53P19397 219 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 LOXP28300 417 aaPredicted RBP18.07■□□□□ 0.48
SS18-224ENST00000584083 ADSLP30566 484 aaPredicted RBP18.07■□□□□ 0.48
SS18-224ENST00000584083 NR1H2P55055 460 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 DHRS4L2Q6PKH6 230 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 ATG4DQ86TL0 474 aaPredicted RBP18.07■□□□□ 0.48
SS18-224ENST00000584083 TMEM99Q8N816 258 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 C11orf65Q8NCR3 313 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 HSD17B8Q92506 261 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 ALPK1Q96QP1 1244 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 ADPRHL2Q9NX46 363 aa18.07■□□□□ 0.48
SS18-224ENST00000584083 ITPR3Q14573 2671 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ELOA3DA6NLF2 546 aaPredicted RBP18.06■□□□□ 0.48
SS18-224ENST00000584083 IGHV1-2P23083 117 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 SELPLGQ14242 412 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 TAB1Q15750 504 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 STK11Q15831 433 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ACKR1Q16570 336 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ELOA3BQ3SY89 546 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 GLIPR1L2Q4G1C9 344 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 C1orf140Q5VVS0 124 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 FBXW9Q5XUX1 488 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 CASP12Q6UXS9 341 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ARMC8Q8IUR7 673 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ELOA3Q8NG57 546 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 OR52E4Q8NGH9 312 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 RSPO3Q9BXY4 272 aaPredicted RBP18.06■□□□□ 0.48
SS18-224ENST00000584083 NGBQ9NPG2 151 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 MED4Q9NPJ6 270 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 MRGBPQ9NV56 204 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 SLC9A8Q9Y2E8 581 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 ROS1P08922 2347 aa18.06■□□□□ 0.48
SS18-224ENST00000584083 MAP1AP78559 2803 aaPredicted RBP18.05■□□□□ 0.48
SS18-224ENST00000584083 AHSA1O95433 338 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 NTF4P34130 210 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 NCALDP61601 193 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 RBBP4Q09028 425 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 SLC17A1Q14916 467 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 MMEL1Q495T6 779 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 TMEM225Q6GV28 225 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 CGB2Q6NT52 195 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 ZNF704Q6ZNC4 412 aaPredicted RBP18.05■□□□□ 0.48
SS18-224ENST00000584083 COMTD1Q86VU5 262 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 PTOV1Q86YD1 416 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 BHLHE22Q8NFJ8 381 aaPredicted RBP18.05■□□□□ 0.48
SS18-224ENST00000584083 STK35Q8TDR2 534 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 TRIM2Q9C040 744 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 PARPBPQ9NWS1 579 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 FLVCR1Q9Y5Y0 555 aa18.05■□□□□ 0.48
SS18-224ENST00000584083 CIB4A0PJX0 185 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 TMEM229AB2RXF0 380 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 FBP2O00757 339 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 GGT1P19440 569 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 COX5AP20674 150 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 RGS8P57771 180 aaPredicted RBP18.04■□□□□ 0.48
SS18-224ENST00000584083 FAPQ12884 760 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 KLF10Q13118 480 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 CYLC2Q14093 348 aaPredicted RBP18.04■□□□□ 0.48
SS18-224ENST00000584083 GPAT4Q86UL3 456 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 RNF217Q8TC41 542 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 SLC25A36Q96CQ1 311 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 MUCL1Q96DR8 90 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 PRR14Q9BWN1 585 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 SAR1AQ9NR31 198 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 BEX4Q9NWD9 120 aaPredicted RBP18.04■□□□□ 0.48
SS18-224ENST00000584083 ASB6Q9NWX5 421 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 SELENONQ9NZV5 590 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 UPB1Q9UBR1 384 aa18.04■□□□□ 0.48
SS18-224ENST00000584083 A0A1B0GWA3 101 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms