RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 SFT2D3Q587I9 215 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 C10orf120Q5SQS8 335 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 C1orf100Q5SVJ3 147 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF530Q6P9A1 599 aaPredicted RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 Q6ZPB1 254 aaPredicted RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CCDC80Q76M96 950 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 SLC35F2Q8IXU6 374 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 MKXQ8IYA7 352 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 SUMF2Q8NBJ7 301 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 MAIP1Q8WWC4 291 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 UBE2E3Q969T4 207 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 TRIM44Q96DX7 344 aaPredicted RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 TTC25Q96NG3 672 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 P2RY13Q9BPV8 354 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 ERP44Q9BS26 406 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 CHRDL1Q9BU40 450 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 LRRN3Q9H3W5 708 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 REEP4Q9H6H4 257 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 RPL36Q9Y3U8 105 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 ASTN1O14525 1302 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 FANCIQ9NVI1 1328 aa2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
PPP4R1-227ENST00000583988 C15orf38-AP3S2A0A0A6YYH1 394 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 CLRN2A0PK11 232 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 PCP4L1A6NKN8 68 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 IGHV4-34P06331 123 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 CAPN1P07384 714 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 CCDC130P13994 396 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 GCAP28676 217 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 IL12AP29459 219 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 DDOSTP39656 456 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 CTRLP40313 264 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 SSR1P43307 286 aaKnown RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 ARRB1P49407 418 aaPredicted RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 BIDP55957 195 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 DLX1P56177 255 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 NCBP1Q09161 790 aaKnown RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF763Q0D2J5 394 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 KLRB1Q12918 225 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 VGLL4Q14135 290 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 SAMD4BQ5PRF9 694 aaKnown RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 KCNIP4Q6PIL6 250 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 TMIGD1Q6UXZ0 262 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 RNF165Q6ZSG1 346 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 RDH10Q8IZV5 341 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 OR2L13Q8N349 312 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 C20orf203Q8NBC4 194 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF740Q8NDX6 193 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 BLOC1S5Q8TDH9 187 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 DCUN1D4Q92564 292 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 MYDGFQ969H8 173 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 FAM210BQ96KR6 192 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 TBX15Q96SF7 602 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 C20orf85Q9H1P6 137 aa2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 NHEJ1Q9H9Q4 299 aaPredicted RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 SMPD3Q9NY59 655 aaPredicted RBP2.6□□□□□ -1.99
PPP4R1-227ENST00000583988 GTF3C1Q12789 2109 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 TRAV26-1A0A087WT03 109 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 NKX2-6A6NCS4 301 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 METTL21EPA6NDL7 271 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 LOC110117498-PIK3R3F6TDL0 507 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 HIP1O00291 1037 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 CPLX1O14810 134 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 NPIPB7O75200 414 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 SNNO75324 88 aaPredicted RBP2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 ALOX5P09917 674 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 TBPP20226 339 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 NUDT1P36639 197 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 IFNAR2P48551 515 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 KLK7P49862 253 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 CAV2P51636 162 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 PKNOX1P55347 436 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 TAS2R19P59542 299 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 SELENOTP62341 195 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 CCDC152Q4G0S7 254 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 TIGD3Q6B0B8 471 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 HSDL2Q6YN16 418 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 PRSS41Q7RTY9 318 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 C6orf223Q8N319 242 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 FAM133AQ8N9E0 248 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 ZNF540Q8NDQ6 660 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 RBM14Q96PK6 669 aaKnown RBP2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 MBOAT4Q96T53 435 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 SLC39A3Q9BRY0 314 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 ZSCAN5AQ9BUG6 496 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 OR11A1Q9GZK7 315 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 NT5C3AQ9H0P0 336 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 RANBP3Q9H6Z4 567 aaPredicted RBP2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 IL26Q9NPH9 171 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 EXTL2Q9UBQ6 330 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 TIMM10BQ9Y5J6 103 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 N6AMT1Q9Y5N5 214 aa2.59□□□□□ -1.99
PPP4R1-227ENST00000583988 KANK1Q14678 1352 aa2.59□□□□□ -2
PPP4R1-227ENST00000583988 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 VSTM2BA6NLU5 285 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 GJE1A6NN92 205 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 H0YCG3 227 aa2.58□□□□□ -2
PPP4R1-227ENST00000583988 AGPAT2O15120 278 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms