RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1.01
SKA2-208ENST00000583927 OR11A1Q9GZK7 315 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 ACTR6Q9GZN1 396 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 IKZF5Q9H5V7 419 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 NPHS2Q9NP85 383 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 MED4Q9NPJ6 270 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 BEX4Q9NWD9 120 aaPredicted RBP8.77□□□□□ -1.01
SKA2-208ENST00000583927 DCTN4Q9UJW0 460 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 ITGB1BP2Q9UKP3 347 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 C2CD3Q4AC94 2353 aa8.77□□□□□ -1.01
SKA2-208ENST00000583927 A0A0G2JND7 137 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 LIPT2A6NK58 231 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ANGPT2O15123 496 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ATP8B1O43520 1251 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 VAMP5O95183 116 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ADAP00813 363 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 TROVE2P10155 538 aaKnown RBP eCLIP8.76□□□□□ -1.01
SKA2-208ENST00000583927 CD53P19397 219 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 KLK2P20151 261 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 FPR1P21462 350 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 PCBP3P57721 371 aaKnown RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 KEAP1Q14145 624 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 DEFB113Q30KQ7 82 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 FAM91A1Q658Y4 838 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ADAM5Q6NVV9 412 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 C20orf204Q6ZNR8 217 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 NET1Q7Z628 596 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 DHDDSQ86SQ9 333 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ATG4DQ86TL0 474 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 SERPINA11Q86U17 422 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 SLC30A8Q8IWU4 369 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 HIPK4Q8NE63 616 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 NFKBIDQ8NI38 313 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 KISS1RQ969F8 398 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 PIGTQ969N2 578 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 TMEM45BQ96B21 275 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 BOD1Q96IK1 185 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 ZNF300Q96RE9 604 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 RSPO3Q9BXY4 272 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 NGBQ9NPG2 151 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 PARPBPQ9NWS1 579 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 C6orf203Q9P0P8 240 aaPredicted RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 MALT1Q9UDY8 824 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 SLC9A8Q9Y2E8 581 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 PLEKHA6Q9Y2H5 1048 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 NOSIPQ9Y314 301 aaKnown RBP8.76□□□□□ -1.01
SKA2-208ENST00000583927 USF3Q68DE3 2245 aa8.76□□□□□ -1.01
SKA2-208ENST00000583927 NF1P21359 2839 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 ZC3H12DA2A288 527 aaKnown RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 AQP7P3A6NL99 342 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 PDLIM1O00151 329 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 SERPINB7O75635 380 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 C8BP07358 591 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 PRG2P13727 222 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 IL32P24001 234 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 NTF4P34130 210 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 IDUAP35475 653 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 P2RY4P51582 365 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 OR2B6P58173 313 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 SCARB2Q14108 478 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 POU4F3Q15319 338 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 ACKR1Q16570 336 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 TIMM23BQ5SRD1 257 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 FBXW9Q5XUX1 488 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 ANKRD34AQ69YU3 496 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 SEZ6L2Q6UXD5 910 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 BHLHA15Q7RTS1 189 aaPredicted RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 PTOV1Q86YD1 416 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 CCDC103Q8IW40 242 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 ZNF100Q8IYN0 542 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 LRRC75A-AS1Q8N1F1 130 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 ZNF433Q8N7K0 673 aaPredicted RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 C11orf65Q8NCR3 313 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 MFSD8Q8NHS3 518 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 DNAJA4Q8WW22 397 aaPredicted RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 S100PBPQ96BU1 408 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 PIK3IP1Q96FE7 263 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 TMUB1Q9BVT8 246 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 TMEM120AQ9BXJ8 343 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 TRIM2Q9C040 744 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 AMBRA1Q9C0C7 1298 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 KAT8Q9H7Z6 458 aaKnown RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 TESQ9UGI8 421 aaKnown RBP8.75□□□□□ -1.01
SKA2-208ENST00000583927 FLVCR1Q9Y5Y0 555 aa8.75□□□□□ -1.01
SKA2-208ENST00000583927 NSD1Q96L73 2696 aaPredicted RBP8.74□□□□□ -1.01
SKA2-208ENST00000583927 ARFGEF3Q5TH69 2177 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 BBIP1A8MTZ0 92 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 FTCDNL1E5RQL4 147 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 SLC22A2O15244 555 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 FRS3O43559 492 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 OR2T1O43869 369 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 FMO6PO60774 539 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 RAMP1O60894 148 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 MRPL33O75394 65 aaKnown RBP8.74□□□□□ -1.01
SKA2-208ENST00000583927 MFN2O95140 757 aa8.74□□□□□ -1.01
SKA2-208ENST00000583927 PNMTP11086 282 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms