RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TMEM234Q8WY98 164 aa10.74□□□□□ -0.69
TOP3A-215ENST00000583328 TSSK3Q96PN8 268 aa10.74□□□□□ -0.69
TOP3A-215ENST00000583328 KCNS3Q9BQ31 491 aa10.74□□□□□ -0.69
TOP3A-215ENST00000583328 C1orf50Q9BV19 199 aa10.74□□□□□ -0.69
TOP3A-215ENST00000583328 THUMPD3Q9BV44 507 aaKnown RBP10.74□□□□□ -0.69
TOP3A-215ENST00000583328 WDR55Q9H6Y2 383 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-215ENST00000583328 NOP53Q9NZM5 478 aaKnown RBP10.74□□□□□ -0.69
TOP3A-215ENST00000583328 MALT1Q9UDY8 824 aa10.74□□□□□ -0.69
TOP3A-215ENST00000583328 FAF1Q9UNN5 650 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-215ENST00000583328 B9A039 149 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 AQP5P55064 265 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SLC25A3Q00325 362 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SLC9B1Q4ZJI4 515 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 KLHL24Q6TFL4 600 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 CASP12Q6UXS9 341 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 RINLQ6ZS11 566 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 CCDC103Q8IW40 242 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 C1orf162Q8NEQ5 155 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 CLHC1Q8NHS4 586 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SLC25A43Q8WUT9 341 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 ST8SIA1Q92185 356 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 HPS1Q92902 700 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 DNAJA3Q96EY1 480 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SIKE1Q9BRV8 207 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 LAT2Q9GZY6 243 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 METTL17Q9H7H0 456 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SIRT3Q9NTG7 399 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 BAIAP2L1Q9UHR4 511 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 DCTN4Q9UJW0 460 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 SPIN1Q9Y657 262 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-215ENST00000583328 KCNE3Q9Y6H6 103 aa10.73□□□□□ -0.69
TOP3A-215ENST00000583328 HEATR1Q9H583 2144 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 SERINC4A6NH21 518 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 NPIPB9F8W1W9 429 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PDLIM1O00151 329 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 POLR3GO15318 223 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 KRT16P08779 473 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 G6PDP11413 515 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 DDX5P17844 614 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PCMT1P22061 227 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 IL2RGP31785 369 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 HPCAL1P37235 193 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 RPL3P39023 403 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 MAGEA8P43361 318 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 CCT3P49368 545 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 OR2B6P58173 313 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PDE7AQ13946 482 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PTGR1Q14914 329 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 ZSWIM7Q19AV6 140 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 SPDYE7PQ495Y7 208 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PDZK1Q5T2W1 519 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 C1QTNF12Q5T7M4 302 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 NXNQ6DKJ4 435 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 VHLLQ6RSH7 139 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 R3HCC1LQ7Z5L2 792 aaKnown RBP10.72□□□□□ -0.69
TOP3A-215ENST00000583328 STON2Q8WXE9 905 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 MTERF3Q96E29 417 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 OR52B2Q96RD2 323 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 SLC7A10Q9NS82 523 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 ACER3Q9NUN7 267 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 PARPBPQ9NWS1 579 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 FAM53CQ9NYF3 392 aa10.72□□□□□ -0.69
TOP3A-215ENST00000583328 LILRA1O75019 489 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 DYSFO75923 2080 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 PMS2P2O95744 297 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 CSTAP01040 98 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 ERCC1P07992 297 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 TACSTD2P09758 323 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 ALDOCP09972 364 aaKnown RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 OR4A8P0C604 315 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 TROVE2P10155 538 aaKnown RBP eCLIP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 DAOP14920 347 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 CDH2P19022 906 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 PGCP20142 388 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 GIFP27352 417 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 MPGP29372 298 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 APOBEC1P41238 236 aaKnown RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 COMPP49747 757 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 IDH3AP50213 366 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 IDH3GP51553 393 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 SLC16A1P53985 500 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 CDH15P55291 814 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 TP53BP2Q13625 1128 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 GPR68Q15743 365 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 LSM12Q3MHD2 195 aaKnown RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 TSPO2Q5TGU0 170 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 ARFGEF3Q5TH69 2177 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 UGT2A3Q6UWM9 527 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 SEMA6DQ8NFY4 1073 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 OR56A1Q8NGH5 318 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 ZNF563Q8TA94 476 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 ZNF317Q96PQ6 595 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-215ENST00000583328 SNX18Q96RF0 628 aa10.71□□□□□ -0.69
TOP3A-215ENST00000583328 NPHS2Q9NP85 383 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms