RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 TNFAIP8L2Q6P589 184 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SPATA19Q7Z5L4 167 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 MEX3DQ86XN8 651 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 HOMEZQ8IX15 550 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 XAGE5Q8WWM1 108 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CNOT9Q92600 299 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMEM45BQ96B21 275 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ROPN1LQ96C74 230 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 BOD1Q96IK1 185 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 NAA11Q9BSU3 229 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OSGIN1Q9UJX0 560 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PCDHGB4Q9UN71 923 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
CDK5RAP3-226ENST00000583182 DYSFO75923 2080 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PRAMEF27A3QJZ7 478 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 B9A039 149 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZNF208O43345 1280 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 STAMBPO95630 424 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR4A8P0C604 315 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 CLDN8P56748 225 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TBRG1Q3YBR2 411 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PAQR6Q6TCH4 344 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMEM99Q8N816 258 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZNF540Q8NDQ6 660 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TUBGCP3Q96CW5 907 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 DDIT4LQ96D03 193 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 POLE3Q9NRF9 147 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RNASET2O00584 256 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SCN2BO60939 215 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 LILRA1O75019 489 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PDE5AO76074 875 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 AGR2O95994 175 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 C1QCP02747 245 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TACSTD2P09758 323 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TACR3P29371 465 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 HTR3AP46098 478 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PPOXP50336 477 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 LGALS3BPQ08380 585 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 EFNB3Q15768 340 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OTUD3Q5T2D3 398 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ATAD3BQ5T9A4 648 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 POMGNT2Q8NAT1 580 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR9K2Q8NGE7 335 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR4A15Q8NGL6 344 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PMM1Q92871 262 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 PLA2G12AQ9BZM1 189 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 OBP2BQ9NPH6 170 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 TMEFF2Q9UIK5 374 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-226ENST00000583182 NR5A2O00482 541 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 AKR7A3O95154 331 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 LGI1O95970 557 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CRYAAP02489 173 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 GIFP27352 417 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CFPP27918 469 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CALCRP30988 508 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 SRP14P37108 136 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 TUBA1BP68363 451 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 TUBA4AP68366 448 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 NAAAQ02083 359 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CEACAM7Q14002 265 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 SAXO2Q658L1 398 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 ANKRD16Q6P6B7 361 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 TUBA1AQ71U36 451 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 LINGO2Q7L985 606 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 ZCCHC24Q8N2G6 241 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 UBLCP1Q8WVY7 318 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 APOPT1Q96IL0 206 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 KCNS3Q9BQ31 491 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 SF3B5Q9BWJ5 86 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 TMEM45AQ9NWC5 275 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 MKS1Q9NXB0 559 aa12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CRNNQ9UBG3 495 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-226ENST00000583182 LIPT2A6NK58 231 aa12.82□□□□□ -0.36
CDK5RAP3-226ENST00000583182 AQP7P3A6NL99 342 aa12.82□□□□□ -0.36
CDK5RAP3-226ENST00000583182 CPSF4O95639 269 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 587.1 ms