RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZIC4Q8N9L1 334 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 OR4A15Q8NGL6 344 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 XAGE5Q8WWM1 108 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 TMEM45BQ96B21 275 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 ROPN1LQ96C74 230 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 APOPT1Q96IL0 206 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 SLC38A2Q96QD8 506 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 RHOXF2Q9BQY4 288 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 SAP130Q9H0E3 1048 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 SEC61A2Q9H9S3 476 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 MYOZ1Q9NP98 299 aaPredicted RBP14.06□□□□□ -0.16
SREBF1-221ENST00000583080 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
SREBF1-221ENST00000583080 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 SLC17A7Q9P2U7 560 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 OSGIN1Q9UJX0 560 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 PCDHGB4Q9UN71 923 aa14.06□□□□□ -0.16
SREBF1-221ENST00000583080 TCF21O43680 179 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 EIF1BO60739 113 aaKnown RBP14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TACR3P29371 465 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TUBA1BP68363 451 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TUBA4AP68366 448 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TBRG1Q3YBR2 411 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TUBA1AQ71U36 451 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 AAED1Q7RTV5 226 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 MEX3DQ86XN8 651 aaKnown RBP14.05□□□□□ -0.16
SREBF1-221ENST00000583080 RFLNBQ8N5W9 214 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-221ENST00000583080 OR9K2Q8NGE7 335 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 UBLCP1Q8WVY7 318 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-221ENST00000583080 OIT3Q8WWZ8 545 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 TUBGCP3Q96CW5 907 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 DDIT4LQ96D03 193 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 NAA11Q9BSU3 229 aaPredicted RBP14.05□□□□□ -0.16
SREBF1-221ENST00000583080 POLE3Q9NRF9 147 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 ZDHHC2Q9UIJ5 367 aa14.05□□□□□ -0.16
SREBF1-221ENST00000583080 RNASET2O00584 256 aaKnown RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 ZNF208O43345 1280 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 AKR7A3O95154 331 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 LGI1O95970 557 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 GUSBP08236 651 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 OR4A8P0C604 315 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 FKBP2P26885 142 aaKnown RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 CALCRP30988 508 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 POLR2HP52434 150 aaKnown RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 CLDN8P56748 225 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 RUNX1T1Q06455 604 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 ZSWIM7Q19AV6 140 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 OTUD3Q5T2D3 398 aaPredicted RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 ATAD3BQ5T9A4 648 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 AP1ARQ63HQ0 302 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 OR1K1Q8NGR3 316 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 ALKBH3Q96Q83 286 aaPredicted RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 KCNS3Q9BQ31 491 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 PLK3Q9H4B4 646 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.04□□□□□ -0.16
SREBF1-221ENST00000583080 MKS1Q9NXB0 559 aa14.04□□□□□ -0.16
SREBF1-221ENST00000583080 B9A039 149 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 NR5A2O00482 541 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 SCN2BO60939 215 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 LILRA1O75019 489 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 STAMBPO95630 424 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 CECR9P0C854 216 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 HTR3AP46098 478 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 KHKP50053 298 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 PPOXP50336 477 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 NAAAQ02083 359 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 EFNB3Q15768 340 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 GPAT3Q53EU6 434 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 SAXO2Q658L1 398 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 LINGO2Q7L985 606 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 MYPOPQ86VE0 399 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-221ENST00000583080 ZCCHC24Q8N2G6 241 aaKnown RBP14.03□□□□□ -0.16
SREBF1-221ENST00000583080 POMGNT2Q8NAT1 580 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 AURKBQ96GD4 344 aaPredicted RBP14.03□□□□□ -0.16
SREBF1-221ENST00000583080 BOD1Q96IK1 185 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 SNX18Q96RF0 628 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 PLA2G12AQ9BZM1 189 aa14.03□□□□□ -0.16
SREBF1-221ENST00000583080 TENM1Q9UKZ4 2725 aa14.02□□□□□ -0.16
SREBF1-221ENST00000583080 LIPT2A6NK58 231 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 AQP7P3A6NL99 342 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 PDE5AO76074 875 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 CPSF4O95639 269 aaKnown RBP14.02□□□□□ -0.17
SREBF1-221ENST00000583080 AGR2O95994 175 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 CRYAAP02489 173 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 CELA3BP08861 270 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 DAOP14920 347 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 UQCRC2P22695 453 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 GIFP27352 417 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 APEX1P27695 318 aaKnown RBP14.02□□□□□ -0.17
SREBF1-221ENST00000583080 CFPP27918 469 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 SRP14P37108 136 aaKnown RBP14.02□□□□□ -0.17
SREBF1-221ENST00000583080 SELENOPP49908 381 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 IDH3GP51553 393 aaPredicted RBP14.02□□□□□ -0.17
SREBF1-221ENST00000583080 HPCAP84074 193 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 EMX2Q04743 252 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 CEACAM7Q14002 265 aa14.02□□□□□ -0.17
SREBF1-221ENST00000583080 OR7A5Q15622 319 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms