RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 OPN1MWP04001 364 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 OPN1MW2P0DN77 364 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 OPN1MW3P0DN78 364 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 NAT2P11245 290 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 ATP6V1C1P21283 382 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 SPRP35270 261 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 FNTAP49354 379 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 SESN3P58005 492 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 POU6F2P78424 691 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 TEKQ02763 1124 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 COL10A1Q03692 680 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 NPRL3Q12980 569 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 HSPB3Q12988 150 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 PDIA2Q13087 525 aaKnown RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZNF154Q13106 437 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 SLC17A1Q14916 467 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 FASTKD3Q14CZ7 662 aaKnown RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 FAM83EQ2M2I3 478 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 TECRLQ5HYJ1 363 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZNF771Q7L3S4 317 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 AAED1Q7RTV5 226 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZNF551Q7Z340 670 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 SZRD1Q7Z422 152 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 CENPLQ8N0S6 344 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZNF614Q8N883 585 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 PTGR2Q8N8N7 351 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 ST7LQ8TDW4 575 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 TMEM234Q8WY98 164 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 RAB1CQ92928 201 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 PHF21BQ96EK2 531 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 KTI12Q96EK9 354 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 TIMD4Q96H15 378 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 MS4A4EQ96PG1 132 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 NAA11Q9BSU3 229 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 BTBD2Q9BX70 525 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 CRLF2Q9HC73 371 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 TNFRSF19Q9NS68 423 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 TAS2R7Q9NYW3 318 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 SEC14L4Q9UDX3 406 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 LEF1Q9UJU2 399 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 PCTPQ9UKL6 214 aa7.84□□□□□ -1.15
GGA3-212ENST00000582376 ZNF346Q9UL40 294 aaKnown RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.15
GGA3-212ENST00000582376 IGHV3OR16-10A0A075B7F0 116 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 A0A096LPK6 155 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 MDFIC2A0A1B0GVS7 189 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 SRRM5B3KS81 715 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 TRIM49D1C9J1S8 452 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 PLXNB1O43157 2135 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 TRAF3IP2O43734 574 aaPredicted RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 EIF1BO60739 113 aaKnown RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 OTCP00480 354 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 ANXA4P09525 319 aaPredicted RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 UBL4AP11441 157 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 CHN1P15882 459 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 GLRXP35754 106 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 ARR3P36575 388 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 MAGEB1P43366 347 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 PROK1P58294 105 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 H3F3AP84243 136 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 ZNF763Q0D2J5 394 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 GLIPR1L2Q4G1C9 344 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.83□□□□□ -1.16
GGA3-212ENST00000582376 FAM219BQ5XKK7 198 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 FAM205BPQ63HN1 556 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 LETMD1Q6P1Q0 360 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 LRP11Q86VZ4 500 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 TMEM139Q8IV31 216 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 OR52E2Q8NGJ4 325 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 SGCDQ92629 289 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 TRIM44Q96DX7 344 aaPredicted RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 GIMAP5Q96F15 307 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 OTUB1Q96FW1 271 aaPredicted RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 CHMP6Q96FZ7 201 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 APIPQ96GX9 242 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 THUMPD3Q9BV44 507 aaKnown RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 NELFAQ9H3P2 528 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 MMP26Q9NRE1 261 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 ACER3Q9NUN7 267 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 MYEF2Q9P2K5 600 aaKnown RBP7.83□□□□□ -1.16
GGA3-212ENST00000582376 CHRNA9Q9UGM1 479 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 TRAPPC4Q9Y296 219 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 DTNAQ9Y4J8 743 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 NOX1Q9Y5S8 564 aa7.83□□□□□ -1.16
GGA3-212ENST00000582376 IGHV1-69-2A0A0G2JMI3 117 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 A0A1W2PPW3 197 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 STX16-NPEPL1H3BU86 382 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 MANBAO00462 879 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 STX16O14662 325 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 CYP7B1O75881 506 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 KRT6AP02538 564 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 KRT6BP04259 564 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 ZNF12P17014 697 aa7.82□□□□□ -1.16
GGA3-212ENST00000582376 IVDP26440 423 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms