RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 KCNS2Q9ULS6 477 aa12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 TMED7Q9Y3B3 224 aa12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.37
CDC42EP4-208ENST00000582303 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 A0A1W2PR80 420 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 VSTM5A8MXK1 200 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 PDLIM1O00151 329 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 BIRC5O15392 142 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 LMX1BO60663 402 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 VAMP5O95183 116 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 SERPINE1P05121 402 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 CCNA2P20248 432 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 CXCR1P25024 350 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 TACR3P29371 465 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 S100A3P33764 101 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 PDLIM4P50479 330 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 COPZ1P61923 177 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 CASP8Q14790 479 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 SLC17A1Q14916 467 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 ZSWIM7Q19AV6 140 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 LRRC74BQ6ZQY2 392 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 BOD1Q96IK1 185 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 C1QTNF6Q9BXI9 259 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 CACYBPQ9HB71 228 aaKnown RBP12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 SLC7A10Q9NS82 523 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 BTNL2Q9UIR0 455 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 OSGIN1Q9UJX0 560 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 RAP2CQ9Y3L5 183 aa12.76□□□□□ -0.37
CDC42EP4-208ENST00000582303 CUBNO60494 3623 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 E9PBE3 544 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 SCN2BO60939 215 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 CRYAAP02489 173 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 ERCC1P07992 297 aaPredicted RBP12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 SRD5A1P18405 259 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 LBPP18428 481 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 ARRB2P32121 409 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 RPL14P50914 215 aaKnown RBP12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 OTUD3Q5T2D3 398 aaPredicted RBP12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 TSPO2Q5TGU0 170 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 PEX5LQ8IYB4 626 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 WDR60Q8WVS4 1066 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 PPP1R36Q96LQ0 422 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 CCDC115Q96NT0 180 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 ARMC7Q9H6L4 198 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 CALML5Q9NZT1 146 aa12.75□□□□□ -0.37
CDC42EP4-208ENST00000582303 A0A096LPI6 279 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 LOC390937A0A1W2PQ73 354 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 ZNF587BE7ETH6 402 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 HMGN4O00479 90 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 TYROBPO43914 113 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 PDE5AO76074 875 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 KRT75O95678 551 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 NR2F1P10589 423 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 NTF4P34130 210 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 ETV4P43268 484 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 ABCE1P61221 599 aaKnown RBP12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 CHI3L2Q15782 390 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 FAM174BQ3ZCQ3 159 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 SPANXN4Q5MJ08 99 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 C9orf135Q5VTT2 229 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 TMEM225Q6GV28 225 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 OLIG3Q7RTU3 272 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 SLC46A3Q7Z3Q1 461 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 RNF130Q86XS8 419 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 ZNF781Q8N8C0 355 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 CNOT9Q92600 299 aaKnown RBP12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 HTRA1Q92743 480 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 ZG16BQ96DA0 208 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 TRIM44Q96DX7 344 aaPredicted RBP12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 FBXO17Q96EF6 278 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 DNAJA3Q96EY1 480 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 KATNB1Q9BVA0 655 aa12.74□□□□□ -0.37
CDC42EP4-208ENST00000582303 CR1P17927 2039 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 TMEM72A0PK05 275 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 CCDC154A6NI56 674 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 AQP7P3A6NL99 342 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 B9A039 149 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 ATP6V1G2-DDX39BF2Z307 99 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 TM9SF1O15321 606 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 BCAS1O75363 584 aaPredicted RBP12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 IMPDH2P12268 514 aa12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
CDC42EP4-208ENST00000582303 SERPINF1P36955 418 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms