RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KCTD7Q96MP8 289 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 CDC14CA4D256 554 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 PLD2O14939 933 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ARPC3O15145 178 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 OIP5O43482 229 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 CYC1P08574 325 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 RPS4XP62701 263 aaKnown RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 GPR50Q13585 617 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 EFR3AQ14156 821 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF362Q5T0B9 420 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 CBLN3Q6UW01 205 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 OR52E2Q8NGJ4 325 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 CHPT1Q8WUD6 406 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 GPX7Q96SL4 187 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF649Q9BS31 505 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ALG8Q9BVK2 526 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 SEMA4CQ9C0C4 833 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 TOR4AQ9NXH8 423 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 SF3B6Q9Y3B4 125 aaKnown RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 IER3IP1Q9Y5U9 82 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 KNTC1P50748 2209 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 GVINP1Q7Z2Y8 2422 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 IGKV1D-42A0A075B6H8 117 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 OR6C70A6NIJ9 312 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 HCRTR2O43614 444 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 CDC40O60508 579 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 FGF9P31371 208 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 E2F1Q01094 437 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF117Q03924 483 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ZFP36L1Q07352 338 aaKnown RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 GALEQ14376 348 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF791Q3KP31 576 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 CRTC2Q53ET0 693 aaPredicted RBP20.67■□□□□ 0.9
CCDC47-204ENST00000582252 SHISA6Q6ZSJ9 500 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 MISPQ8IVT2 679 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 GPALPP1Q8IXQ4 340 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 C10orf53Q8N6V4 93 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 MINDY2Q8NBR6 621 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 MED18Q9BUE0 208 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 HCAR1Q9BXC0 346 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 ASB6Q9NWX5 421 aa20.67■□□□□ 0.9
CCDC47-204ENST00000582252 TRDV1A0A1B0GX56 115 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 SULT1C4O75897 302 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 HLA-DPB1P04440 258 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 SBK2P0C263 348 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 GALP22466 123 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 EMP2P54851 167 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 RPS25P62851 125 aaKnown RBP20.66■□□□□ 0.9
CCDC47-204ENST00000582252 RNF4P78317 190 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 CBFBQ13951 182 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF74Q16587 644 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 STPG1Q5TH74 334 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 FCRLBQ6BAA4 426 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 OR10H4Q8NGA5 316 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 COX4I2Q96KJ9 171 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 CEP19Q96LK0 163 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 ADAM19Q9H013 955 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 NANSQ9NR45 359 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 TBCCD1Q9NVR7 557 aa20.66■□□□□ 0.9
CCDC47-204ENST00000582252 C19orf25Q9UFG5 118 aaPredicted RBP20.66■□□□□ 0.9
CCDC47-204ENST00000582252 MCIDASD6RGH6 385 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 GDF9O60383 454 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 TIAF1O95411 115 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 HIST1H1CP16403 213 aaKnown RBP20.65■□□□□ 0.9
CCDC47-204ENST00000582252 ITPKBP27987 946 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 RPS19P39019 145 aaKnown RBP20.65■□□□□ 0.9
CCDC47-204ENST00000582252 TAS2R43P59537 309 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 IL11RAQ14626 422 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 C11orf91Q3C1V1 193 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 CD200R1LQ6Q8B3 271 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 LRRC17Q8N6Y2 441 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 CYB561A3Q8NBI2 242 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 SLC38A9Q8NBW4 561 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 ATP6V1C2Q8NEY4 427 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 OR5W2Q8NH69 310 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 TMEM203Q969S6 136 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 TRMT61AQ96FX7 289 aaKnown RBP20.65■□□□□ 0.9
CCDC47-204ENST00000582252 NRIP3Q9NQ35 241 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 TRIM36Q9NQ86 728 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 HIF3AQ9Y2N7 669 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 PCDHGB7Q9Y5F8 929 aa20.65■□□□□ 0.9
CCDC47-204ENST00000582252 VSTM2BA6NLU5 285 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 PROB1E7EW31 1015 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 CDRT1O95170 752 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 MT-ND5P03915 603 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 GAAP10253 952 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 GP1BBP13224 206 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 APEHP13798 732 aaKnown RBP20.64■□□□□ 0.9
CCDC47-204ENST00000582252 CXCR1P25024 350 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 TACR3P29371 465 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 EVI2BP34910 448 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 CD79BP40259 229 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 ETV6P41212 452 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 SLC35D3Q5M8T2 416 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 SPANXN2Q5MJ10 180 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 C22orf42Q6IC83 251 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 PIP4P1Q86T03 277 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 MARCH3Q86UD3 253 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 KLBQ86Z14 1044 aa20.64■□□□□ 0.9
CCDC47-204ENST00000582252 TMEM99Q8N816 258 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms