RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PIGXQ8TBF5 258 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 MRAPQ8TCY5 172 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GRK7Q8WTQ7 553 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 BCL2L2Q92843 193 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 C16orf58Q96GQ5 468 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 SHCBP1LQ9BZQ2 653 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 BEX1Q9HBH7 125 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GIN1Q9NXP7 522 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 C1RLQ9NZP8 487 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 MYEF2Q9P2K5 600 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 GRID1Q9ULK0 1009 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
SMARCE1-217ENST00000580654 A0A096LPE4 126 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MDFIC2A0A1B0GVS7 189 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 A0A1W2PPZ6 126 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 CLPSL1A2RUU4 121 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 FAM159BA6NKW6 160 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 TRIM49D1C9J1S8 452 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 NPIPB9F8W1W9 429 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MANBAO00462 879 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 PIP5K1BO14986 540 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 PMS2P2O95744 297 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 LGI1O95970 557 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 NGFP01138 241 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MAGEB1P43366 347 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 EVX1P49640 407 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 PRKAG1P54619 331 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 ARL4CP56559 192 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 SESN3P58005 492 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 LOXL3P58215 753 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 LCN2P80188 198 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 C2orf80Q0P641 193 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 SNTB2Q13425 540 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 TECRLQ5HYJ1 363 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 KRT80Q6KB66 452 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 CCBE1Q6UXH8 406 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 LRIG3Q6UXM1 1119 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MMGT1Q8N4V1 131 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 OR5W2Q8NH69 310 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 POP5Q969H6 163 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 RAB39BQ96DA2 213 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 PHF21BQ96EK2 531 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF385AQ96PM9 386 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 ZNF416Q9BWM5 594 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 ACPTQ9BZG2 426 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 NOX3Q9HBY0 568 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 MMP26Q9NRE1 261 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 OXSMQ9NWU1 459 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 TESQ9UGI8 421 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 LEF1Q9UJU2 399 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 SNX6Q9UNH7 406 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 SLC9A8Q9Y2E8 581 aa6.53□□□□□ -1.36
SMARCE1-217ENST00000580654 TCRBV9S1A1TA0A576 114 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 HMX2A2RU54 273 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 VSTM5A8MXK1 200 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 STX16O14662 325 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CDC14BO60729 498 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 OR4F21O95013 312 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 NDUFA7O95182 113 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 GPANK1O95872 356 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 C2P06681 752 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 RPS17P08708 135 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 NAT2P11245 290 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 HSD3B1P14060 373 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CBR1P16152 277 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 NR4A1P22736 598 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CRABP2P29373 138 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 NTSP30990 170 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 SPRP35270 261 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 MAGEA8P43361 318 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 HTR6P50406 440 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CDH13P55290 713 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 MERTKQ12866 999 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 HSPB3Q12988 150 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 DAG1Q14118 895 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 HLXQ14774 488 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 SLC17A1Q14916 467 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 VPS26BQ4G0F5 336 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 ARMCX4Q5H9R4 360 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF362Q5T0B9 420 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 ZBED8Q8IZ13 594 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 TMCO5AQ8N6Q1 288 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 OR4F5Q8NH21 305 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CDC26Q8NHZ8 85 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 MAGEE2Q8TD90 523 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 CDS1Q92903 461 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 KTI12Q96EK9 354 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 AURKBQ96GD4 344 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 SYT3Q9BQG1 590 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 GATA5Q9BWX5 397 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 BTBD2Q9BX70 525 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 OR11A1Q9GZK7 315 aa6.52□□□□□ -1.37
SMARCE1-217ENST00000580654 TMEM45AQ9NWC5 275 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms