RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 TMEM225Q6GV28 225 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 OR7E24Q6IFN5 339 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 ABHD12BQ7Z5M8 362 aaPredicted RBP17.83■□□□□ 0.44
SMG8-204ENST00000580498 FUNDC1Q8IVP5 155 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 NFKBIDQ8NI38 313 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 MAL2Q969L2 176 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 SF3B5Q9BWJ5 86 aaKnown RBP17.83■□□□□ 0.44
SMG8-204ENST00000580498 PIF1Q9H611 641 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 TAS2R16Q9NYV7 291 aa17.83■□□□□ 0.44
SMG8-204ENST00000580498 A0A1W2PPR1 153 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 ELOA3DA6NLF2 546 aaPredicted RBP17.82■□□□□ 0.44
SMG8-204ENST00000580498 ZNF716A6NP11 495 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 ZNF814B7Z6K7 855 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 HS3ST1O14792 307 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 CLOCKO15516 846 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 EDF1O60869 148 aaKnown RBP17.82■□□□□ 0.44
SMG8-204ENST00000580498 ADAM11O75078 769 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 VAMP5O95183 116 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 FOSL1P15407 271 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 PLAURQ03405 335 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 CEACAM7Q14002 265 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 SCARB2Q14108 478 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 MAPK11Q15759 364 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 ELOA3BQ3SY89 546 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 KLHL17Q6TDP4 642 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 C5orf46Q6UWT4 87 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 CLIP4Q8N3C7 705 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 ELOA3Q8NG57 546 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 STK35Q8TDR2 534 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 TSPEARQ8WU66 669 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 THOC1Q96FV9 657 aaKnown RBP17.82■□□□□ 0.44
SMG8-204ENST00000580498 HS3ST6Q96QI5 342 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 TMUB1Q9BVT8 246 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 TMEM38AQ9H6F2 299 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 ING1Q9UK53 422 aaPredicted RBP17.82■□□□□ 0.44
SMG8-204ENST00000580498 GMEB1Q9Y692 573 aa17.82■□□□□ 0.44
SMG8-204ENST00000580498 TEP1Q99973 2627 aaKnown RBP17.82■□□□□ 0.44
SMG8-204ENST00000580498 FREM1Q5H8C1 2179 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 DSCAMO60469 2012 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 KRT33AO76009 404 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 NUDT7P0C024 238 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 ACAA2P42765 397 aaKnown RBP17.81■□□□□ 0.44
SMG8-204ENST00000580498 ADAM8P78325 824 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 H3F3AP84243 136 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 FOXD4Q12950 439 aaPredicted RBP17.81■□□□□ 0.44
SMG8-204ENST00000580498 TSC22D1Q15714 1073 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 CYP51A1Q16850 503 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 DHDDSQ86SQ9 333 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 SERPINA11Q86U17 422 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 GPAT4Q86UL3 456 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 CCDC103Q8IW40 242 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 SLC30A8Q8IWU4 369 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 HIPK4Q8NE63 616 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 DNAJA4Q8WW22 397 aaPredicted RBP17.81■□□□□ 0.44
SMG8-204ENST00000580498 TRIM2Q9C040 744 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 ADPRHL2Q9NX46 363 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 SLC25A37Q9NYZ2 338 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 VAPAQ9P0L0 249 aa17.81■□□□□ 0.44
SMG8-204ENST00000580498 LIPT2A6NK58 231 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 PNMTP11086 282 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 IMPDH2P12268 514 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 GPX2P18283 190 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 COX5AP20674 150 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 IGHV1-2P23083 117 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 RBBP4Q09028 425 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 FAPQ12884 760 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 PAGE3Q5JUK9 113 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 NCMAPQ5T1S8 102 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 C1QTNF12Q5T7M4 302 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 C1orf140Q5VVS0 124 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 KLHL24Q6TFL4 600 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 C22orf34Q6ZV56 151 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.8■□□□□ 0.44
SMG8-204ENST00000580498 DEPDC4Q8N2C3 294 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 ZNF611Q8N823 705 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 C11orf65Q8NCR3 313 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 AKAP1Q92667 903 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMG8-204ENST00000580498 FBXW5Q969U6 566 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 C12orf10Q9HB07 376 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 TMEM27Q9HBJ8 222 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 FAIMQ9NVQ4 179 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 MAGED1Q9Y5V3 778 aaPredicted RBP17.8■□□□□ 0.44
SMG8-204ENST00000580498 HIVEP1P15822 2718 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 ITPR3Q14573 2671 aa17.8■□□□□ 0.44
SMG8-204ENST00000580498 HRNRQ86YZ3 2850 aaPredicted RBP17.8■□□□□ 0.44
SMG8-204ENST00000580498 CELSR1Q9NYQ6 3014 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 OR6C65A6NJZ3 312 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 OR5H1A6NKK0 313 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 AQP7P3A6NL99 342 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 OR2T1O43869 369 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 RAD51DO75771 328 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 IGHV3-9P01782 118 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 RGS8P57771 180 aaPredicted RBP17.79■□□□□ 0.44
SMG8-204ENST00000580498 NFYCQ13952 458 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 Q5PR19 223 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 DHRS4L2Q6PKH6 230 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 PRSS57Q6UWY2 283 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 TMEM108Q6UXF1 575 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 AAED1Q7RTV5 226 aa17.79■□□□□ 0.44
SMG8-204ENST00000580498 RANBP3LQ86VV4 465 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms