RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ATP12AP54707 1039 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC26A5P58743 744 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TGIF1Q15583 401 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OCLNQ16625 522 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CBLN3Q6UW01 205 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 B3GLCTQ6Y288 498 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 WDR54Q9H977 334 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CNTRLQ7Z7A1 2325 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FRG2CA6NGY1 282 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NPIPB9F8W1W9 429 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IDH3BO43837 385 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CCNKO75909 580 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR5F1O95221 314 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 UTS2O95399 124 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CLEC2LP0C7M8 214 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MYL12AP19105 171 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FUT1P19526 365 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LIMK1P53667 647 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PLCXD2Q0VAA5 305 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PCOLCEQ15113 449 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TIMM50Q3ZCQ8 353 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR52I1Q8NGK6 324 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM163Q8TC26 289 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GRHL3Q8TE85 626 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RELTQ969Z4 430 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OMA1Q96E52 524 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RNFT2Q96EX2 444 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TCFL5Q9UL49 500 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 A6NJY4 79 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GNB5O14775 395 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RAB36O95755 333 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 THBS1P07996 1170 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CAV3P56539 151 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 BPIFB3P59826 476 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MBOAT2Q6ZWT7 520 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SYT14Q8NB59 555 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LSM14AQ8ND56 463 aaKnown RBP11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IL17RDQ8NFM7 739 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NACC2Q96BF6 587 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ART5Q96L15 291 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SDHCQ99643 169 aaPredicted RBP11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DPH1Q9BZG8 443 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SEMA4CQ9C0C4 833 aa11.59□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CDC42EP2O14613 210 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IL33O95760 270 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HPGDP15428 266 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ATP6V1E1P36543 226 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FOLR3P41439 243 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ETV1P50549 477 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NOVA1P51513 510 aaKnown RBP11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FBXW4P57775 412 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR1Q1Q15612 314 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SMARCD3Q6STE5 483 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 WDR88Q6ZMY6 472 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MARCH3Q86UD3 253 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LAX1Q8IWV1 398 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF441Q8N8Z8 693 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TEX19Q8NA77 164 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR11G2Q8NGC1 345 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PFN4Q8NHR9 129 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PHOSPHO1Q8TCT1 267 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OSTF1Q92882 214 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SAMD8Q96LT4 415 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DDA1Q9BW61 102 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ASPNQ9BXN1 380 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NXF2Q9GZY0 626 aaKnown RBP11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ANKRD19PQ9H560 264 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF160Q9HCG1 818 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DNAJB12Q9NXW2 375 aaKnown RBP11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CFL2Q9Y281 166 aa11.58□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NUP210LQ5VU65 1888 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 TRAPPC13A5PLN9 417 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FAM172BPA6NC97 362 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SNTNA6NMZ2 147 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 OR2J2O76002 312 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 WISP1O95388 367 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CSTAP01040 98 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 SCG5P05408 212 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KRT8P05787 483 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 COX6A1P12074 109 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 FPR3P25089 353 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 IL12BP29460 328 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 MTNR1AP48039 350 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 ZNF45Q02386 682 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 PRKCDQ05655 676 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 INSL4Q14641 139 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 KLHL26Q53HC5 615 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 AGAP6Q5VW22 663 aa11.58□□□□□ -0.56
CDK5RAP3-217ENST00000580287 BICRALQ6AI39 1079 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms