RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 NEURL3Q96EH8 262 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
MKS1-209ENST00000580127 SF3B5Q9BWJ5 86 aaKnown RBP15.68■□□□□ 0.1
MKS1-209ENST00000580127 ROPN1BQ9BZX4 212 aaPredicted RBP15.68■□□□□ 0.1
MKS1-209ENST00000580127 ROPN1Q9HAT0 212 aaPredicted RBP15.68■□□□□ 0.1
MKS1-209ENST00000580127 SLC7A10Q9NS82 523 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 TMEM45AQ9NWC5 275 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 FLVCR1Q9Y5Y0 555 aa15.68■□□□□ 0.1
MKS1-209ENST00000580127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.68■□□□□ 0.19e-7■■■■■ 26.8
MKS1-209ENST00000580127 LOC390937A0A1W2PQ73 354 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 OR6C65A6NJZ3 312 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 PDLIM1O00151 329 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 CRYAAP02489 173 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 BPGMP07738 259 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 ERCC1P07992 297 aaPredicted RBP15.67■□□□□ 0.1
MKS1-209ENST00000580127 IGHV4-31P0DP07 118 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 IL7RP16871 459 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 CXCR1P25024 350 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 NTF4P34130 210 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 SERPINF1P36955 418 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 SQLEQ14534 574 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 SLC17A1Q14916 467 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 IQCCQ4KMZ1 466 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 TMEM225Q6GV28 225 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 B3GLCTQ6Y288 498 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 FRRS1Q6ZNA5 592 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 AAED1Q7RTV5 226 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 TMEM45BQ96B21 275 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 DNAJA3Q96EY1 480 aa15.67■□□□□ 0.1
MKS1-209ENST00000580127 CENPVL1A0A0U1RR11 272 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 CFAP73A6NFT4 308 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 HAX1O00165 279 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 FAAHO00519 579 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 APEHP13798 732 aaKnown RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 CDH2P19022 906 aaPredicted RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 TACR3P29371 465 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 S100A3P33764 101 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 COPZ1P61923 177 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 LRRC74AQ0VAA2 488 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 GGTLC2Q14390 218 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 CARTPTQ16568 116 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 OTUD3Q5T2D3 398 aaPredicted RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 TSPO2Q5TGU0 170 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 SAXO2Q658L1 398 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 OLIG3Q7RTU3 272 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 SLC46A3Q7Z3Q1 461 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 ANKRD46Q86W74 232 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 CNOT9Q92600 299 aaKnown RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 TESCQ96BS2 214 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 ZG16BQ96DA0 208 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 VRK1Q99986 396 aaPredicted RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 SLC35A5Q9BS91 424 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 TAPBPLQ9BX59 468 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 AKTIPQ9H8T0 292 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 OSGIN1Q9UJX0 560 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 MOKQ9UQ07 419 aa15.66■□□□□ 0.1
MKS1-209ENST00000580127 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.66■□□□□ 0.1
MKS1-209ENST00000580127 AGAP5A6NIR3 686 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 ATP6V1G2-DDX39BF2Z307 99 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 SCN2BO60939 215 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 VAMP5O95183 116 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 DBIP07108 87 aaKnown RBP15.65■□□□□ 0.1
MKS1-209ENST00000580127 C8BP07358 591 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 ZNF16P17020 682 aaPredicted RBP15.65■□□□□ 0.1
MKS1-209ENST00000580127 NR4A2P43354 598 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 FOXG1P55316 489 aaPredicted RBP15.65■□□□□ 0.1
MKS1-209ENST00000580127 UBE2NP61088 152 aaKnown RBP15.65■□□□□ 0.1
MKS1-209ENST00000580127 PDCD2Q16342 344 aaPredicted RBP15.65■□□□□ 0.1
MKS1-209ENST00000580127 SWI5Q1ZZU3 235 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 PEX5LQ8IYB4 626 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 BOD1Q96IK1 185 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 RAB1BQ9H0U4 201 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 LGALS13Q9UHV8 139 aa15.65■□□□□ 0.1
MKS1-209ENST00000580127 TMEM72A0PK05 275 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 B9A039 149 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 NR2F1P10589 423 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 HOXB1P14653 301 aaPredicted RBP15.64■□□□□ 0.09
MKS1-209ENST00000580127 CASP8Q14790 479 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 ZSWIM7Q19AV6 140 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 FAM120AOSQ5T036 256 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 ARFGEF3Q5TH69 2177 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 MALRD1Q5VYJ5 2156 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 LRRC74BQ6ZQY2 392 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 GPAT4Q86UL3 456 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 LRRC34Q8IZ02 419 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 OR9K2Q8NGE7 335 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 WDR60Q8WVS4 1066 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 AURKBQ96GD4 344 aaPredicted RBP15.64■□□□□ 0.09
MKS1-209ENST00000580127 PPP1R36Q96LQ0 422 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 ZNF317Q96PQ6 595 aaPredicted RBP15.64■□□□□ 0.09
MKS1-209ENST00000580127 ARMC7Q9H6L4 198 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 CHODLQ9H9P2 273 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
MKS1-209ENST00000580127 BTNL2Q9UIR0 455 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 NBEAL1Q6ZS30 2694 aa15.64■□□□□ 0.09
MKS1-209ENST00000580127 ZNF587BE7ETH6 402 aa15.63■□□□□ 0.09
MKS1-209ENST00000580127 HMGN4O00479 90 aa15.63■□□□□ 0.09
MKS1-209ENST00000580127 KLF11O14901 512 aa15.63■□□□□ 0.09
MKS1-209ENST00000580127 TGFAP01135 160 aa15.63■□□□□ 0.09
MKS1-209ENST00000580127 IMPDH2P12268 514 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms