RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 EIF3HO15372 352 aaKnown RBP eCLIP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CTSVO60911 334 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KLHL2O95198 593 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 AP2A1O95782 977 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 TMEM50AO95807 157 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 ANGPTL1O95841 491 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CLPTM1O96005 669 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 SERPINE2P07093 398 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 UBCP0CG48 685 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 AZU1P20160 251 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 LCN1P31025 176 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 S100A5P33763 92 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RPL4P36578 427 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NAA10P41227 235 aaPredicted RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CRATP43155 626 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 BDKRB1P46663 353 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 BRCC3P46736 316 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RFX2P48378 723 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KCNJ3P48549 501 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 ARHGDIAP52565 204 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PSMD4P55036 377 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 GSCP56915 257 aaPredicted RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 BTG1P62324 171 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 LRRC63Q05C16 580 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RGS1Q08116 209 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KLRB1Q12918 225 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RIGQ13278 110 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 EIF2B1Q14232 305 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 FASTKD3Q14CZ7 662 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 ACCSLQ4AC99 568 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 TP53I3Q53FA7 332 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 DCST2Q5T1A1 773 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PDSS1Q5T2R2 415 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 C6orf183Q5T699 404 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 C9orf135Q5VTT2 229 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 STUMQ69YW2 141 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PTRHD1Q6GMV3 140 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 C22orf42Q6IC83 251 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 OR52W1Q6IF63 320 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 ACSM5Q6NUN0 579 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PNCKQ6P2M8 343 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RHBDF2Q6PJF5 856 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 HSDL2Q6YN16 418 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 LRRC74BQ6ZQY2 392 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 COPS6Q7L5N1 327 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KCNMB4Q86W47 210 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 SLC35F2Q8IXU6 374 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KRT222Q8N1A0 295 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PELI3Q8N2H9 469 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 FGFRL1Q8N441 504 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NEXN-AS1Q8NBZ9 246 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 FBXO36Q8NEA4 188 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 OR6S1Q8NH40 331 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 OLIG1Q8TAK6 271 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CNIH3Q8TBE1 160 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 STMN2Q93045 179 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CXorf40BQ96DE9 158 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 SLC47A1Q96FL8 570 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 GLT1D1Q96MS3 346 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CSPG4P5Q96PW8 444 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 CLCC1Q96S66 551 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 UQCC2Q9BRT2 126 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NIPSNAP3BQ9BS92 247 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 TMEM204Q9BSN7 226 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PAPOLGQ9BWT3 736 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PITPNM3Q9BZ71 974 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RAB34Q9BZG1 259 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NSRP1Q9H0G5 558 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RAB1BQ9H0U4 201 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 BICC1Q9H694 974 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NIPAL2Q9H841 368 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NMRAL1Q9HBL8 299 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 DMAP1Q9NPF5 467 aaPredicted RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 ADAP2Q9NPF8 381 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 NANSQ9NR45 359 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 MYO6Q9UM54 1294 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 RNF24Q9Y225 148 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 EXOSC1Q9Y3B2 195 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 PTGDR2Q9Y5Y4 395 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 FRMPD3Q5JV73 1810 aa2.69□□□□□ -1.98
KPNB1-208ENST00000580019 KIAA0100Q14667 2235 aaKnown RBP2.69□□□□□ -1.98
KPNB1-208ENST00000580019 LAMA2P24043 3122 aaKnown RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 SLIT3O75094 1523 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LY75O60449 1722 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 IGLV5-37A0A075B6J1 123 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TRAV6A0A075B6T7 132 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 A0A1B0GVT2 93 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 A0A1W2PRD5 423 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TMEM120BA0PK00 339 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LINC01553A4QN01 128 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR5H15A6NDH6 313 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 OR6C65A6NJZ3 312 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 LRRIQ3A6PVS8 624 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TMCO5BA8MYB1 307 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 INAFM1C9JVW0 142 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 G3V4G9 280 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 M0R3G1 203 aa2.68□□□□□ -1.98
KPNB1-208ENST00000580019 TRAFD1O14545 582 aaPredicted RBP2.68□□□□□ -1.98
KPNB1-208ENST00000580019 NDUFAB1O14561 156 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms