RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 FAM76AQ8TAV0 307 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 SLC25A28Q96A46 364 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 AURKBQ96GD4 344 aaPredicted RBP12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 EGLN2Q96KS0 407 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF416Q9BWM5 594 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 DPH5Q9H2P9 285 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 CTPS2Q9NRF8 586 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 OPN4Q9UHM6 478 aa12.11□□□□□ -0.47
PPP4R1-206ENST00000577779 A0A096LPE4 126 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 A0A1W2PPZ6 126 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 SERTM1A2A2V5 107 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 M0QZ24 198 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ANKRD28O15084 1053 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 IGKV3-15P01624 115 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ENO1P06733 434 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 MAGEA4P43358 317 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 EVX1P49640 407 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 CLK1P49759 484 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 MRPS25P82663 173 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 UNC50Q53HI1 259 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF385BQ569K4 471 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 PPCDCQ96CD2 204 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 RAB39BQ96DA2 213 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 FAM120BQ96EK7 910 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 C1orf147Q96MC9 270 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF317Q96PQ6 595 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 NAA11Q9BSU3 229 aaPredicted RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 CCDC106Q9BWC9 280 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 GRHL1Q9NZI5 618 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 TMEM181Q9P2C4 612 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 TRAPPC4Q9Y296 219 aa12.1□□□□□ -0.47
PPP4R1-206ENST00000577779 ARHGAP32A7KAX9 2087 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 GSNP06396 782 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 SBK3P0C264 359 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 UBTFL6P0CB48 400 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 CCNA2P20248 432 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 GATA3P23771 443 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ALDH3B1P43353 468 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 SLC35A1P78382 337 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 MRPS11P82912 194 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 MVKQ03426 396 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF678Q5SXM1 525 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 TEX35Q5T0J7 233 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 OTUD3Q5T2D3 398 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 TREML1Q86YW5 311 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 GSPT2Q8IYD1 628 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ADAMTS15Q8TE58 950 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 UBE2FQ969M7 185 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 ZNF764Q96H86 408 aaPredicted RBP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 GPA33Q99795 319 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 NOX3Q9HBY0 568 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 SH3BP4Q9P0V3 963 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 KCNE3Q9Y6H6 103 aa12.09□□□□□ -0.47
PPP4R1-206ENST00000577779 AKAP10O43572 662 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 DEAF1O75398 565 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 RP2O75695 350 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 NCR1O76036 304 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 CSTAP01040 98 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 KNG1P01042 644 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 CBR1P16152 277 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 TCP1P17987 556 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 OMGP23515 440 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 FRKP42685 505 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 SEC24CP53992 1094 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 PKNOX1P55347 436 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 NPRL3Q12980 569 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 LCP2Q13094 533 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 TUSC1Q2TAM9 212 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 OR9K2Q8NGE7 335 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 TMIGD2Q96BF3 282 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 TMEM237Q96Q45 408 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 ALKBH3Q96Q83 286 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 SYT3Q9BQG1 590 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 ACTRT3Q9BYD9 372 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 REEP4Q9H6H4 257 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 CRLF2Q9HC73 371 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 FAF1Q9UNN5 650 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 COL7A1Q02388 2944 aa12.08□□□□□ -0.48
PPP4R1-206ENST00000577779 CCDC188H7C350 402 aa12.07□□□□□ -0.48
PPP4R1-206ENST00000577779 PCGF2P35227 344 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms