RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 OR6C65A6NJZ3 312 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 ZNF587BE7ETH6 402 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 PLIN3O60664 434 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 FCMRO60667 390 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 LILRA1O75019 489 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 VENTXO95231 258 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 UQCRBP14927 111 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 IFNGR1P15260 489 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 ECHS1P30084 290 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 KHKP50053 298 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
COPS3-214ENST00000577246 NAAAQ02083 359 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 ATP6AP1LQ52LC2 224 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 AAED1Q7RTV5 226 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 ADGRG3Q86Y34 549 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 NUP37Q8NFH4 326 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 TWIST2Q8WVJ9 160 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 COQ8BQ96D53 544 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 DNAJA3Q96EY1 480 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 SLC35G5Q96KT7 338 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 TUBB1Q9H4B7 451 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 DYNLRB1Q9NP97 96 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 TBK1Q9UHD2 729 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 KCNE5Q9UJ90 142 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 GRIP1Q9Y3R0 1128 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
COPS3-214ENST00000577246 ARPC4-TTLL3A0A0A6YYG9 625 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 TRIM77I1YAP6 450 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 RIPK2O43353 540 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 SLU7O95391 586 aaKnown RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 EGR1P18146 543 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 CCNA2P20248 432 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 NPR2P20594 1047 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 IL2RGP31785 369 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 CRHR1P34998 444 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 RPS26P62854 115 aaKnown RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 HBA1P69905 142 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 HPCAP84074 193 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 WHAMMP3Q1A5X7 153 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 TBRG1Q3YBR2 411 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 OTUD3Q5T2D3 398 aaPredicted RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 ANKRD16Q6P6B7 361 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 C6orf120Q7Z4R8 191 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 FAM169BQ8N8A8 192 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 OR1K1Q8NGR3 316 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 MAGEE2Q8TD90 523 aaPredicted RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 UBASH3BQ8TF42 649 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 DUSP26Q9BV47 211 aa11.6□□□□□ -0.55
COPS3-214ENST00000577246 RBM4Q9BWF3 364 aaKnown RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
COPS3-214ENST00000577246 TMED7-TICAM2A0A0A6YYA0 188 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 CENPVL1A0A0U1RR11 272 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 RNF103-CHMP3A0A140T963 221 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 PIP5K1BO14986 540 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 GPIP06744 558 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 FGF4P08620 206 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 CECR9P0C854 216 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 CREB1P16220 341 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 IDH2P48735 452 aaKnown RBP11.59□□□□□ -0.55
COPS3-214ENST00000577246 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
COPS3-214ENST00000577246 LGALS3BPQ08380 585 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 RIN1Q13671 783 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 PTGR1Q14914 329 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 USP43Q70EL4 1123 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 CMIPQ8IY22 773 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 FNDC5Q8NAU1 212 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 MIPOL1Q8TD10 442 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 MZB1Q8WU39 189 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 AURKBQ96GD4 344 aaPredicted RBP11.59□□□□□ -0.55
COPS3-214ENST00000577246 TMED7Q9Y3B3 224 aa11.59□□□□□ -0.55
COPS3-214ENST00000577246 TMEM89A2RUT3 159 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 COPEO14579 308 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 TRIM13O60858 407 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 PEX11AO75192 247 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 VAMP5O95183 116 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 IGLV1-44P01699 117 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 IMPDH2P12268 514 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 LIMS1P48059 325 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 KCNJ10P78508 379 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 POU3F1Q03052 451 aaPredicted RBP11.58□□□□□ -0.56
COPS3-214ENST00000577246 CCNIQ14094 377 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 GNA13Q14344 377 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 ADRM1Q16186 407 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 MAPK14Q16539 360 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 AP1ARQ63HQ0 302 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 TYW3Q6IPR3 259 aaKnown RBP11.58□□□□□ -0.56
COPS3-214ENST00000577246 SPATA21Q7Z572 469 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 GPAT4Q86UL3 456 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 SVOPLQ8N434 492 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 MNS1Q8NEH6 495 aa11.58□□□□□ -0.56
COPS3-214ENST00000577246 DOK1Q99704 481 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms