RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 METTL25Q8N6Q8 603 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 RNF148Q8N7C7 305 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 PCYOX1LQ8NBM8 494 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 RELL2Q8NC24 303 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 C11orf65Q8NCR3 313 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 FAM156AQ8NDB6 213 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 OR10D3Q8NH80 312 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 MBD3L2Q8NHZ7 208 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 ST8SIA1Q92185 356 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 SDCCAG3Q96C92 435 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 REXO5Q96IC2 774 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 ARL5BQ96KC2 179 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 MRGPRX4Q96LA9 322 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 LRRC37BQ96QE4 947 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 CDADC1Q9BWV3 514 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 PINK1Q9BXM7 581 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 MRGBPQ9NV56 204 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 OSGIN1Q9UJX0 560 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 AP4B1Q9Y6B7 739 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 HEATR5AQ86XA9 2040 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 GTF3C1Q12789 2109 aa8.47□□□□□ -1.05
NPLOC4-219ENST00000576713 IGHV3-15A0A0B4J1V0 119 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 TMEM72A0PK05 275 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 PRORSD1PA6NEY8 169 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 FAM90A27PA6NNH2 459 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 FAM220BPB1ANY3 271 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF814B7Z6K7 855 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 FAAHO00519 579 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 LYPD3O95274 346 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 THY1P04216 161 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 PTNP21246 168 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ELK4P28324 431 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 TACR3P29371 465 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CPOXP36551 454 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 EIF1P41567 113 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 KCNJ5P48544 419 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 GSK3BP49841 420 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 PSME3P61289 254 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 BNIP2Q12982 314 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 GNA13Q14344 377 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 LARS2Q15031 903 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 PON3Q15166 354 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 GUSBP1Q15486 140 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 TMEM176BQ3YBM2 270 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 RIPPLY2Q5TAB7 128 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 GKAP1Q5VSY0 366 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CCDC80Q76M96 950 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ARMC8Q8IUR7 673 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF808Q8N4W9 903 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CCDC197Q8NCU1 140 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 RBM15BQ8NDT2 890 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ZNF563Q8TA94 476 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 C3orf49Q96BT1 292 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CMTM5Q96DZ9 223 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 KLHL15Q96M94 604 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ARHGDIGQ99819 225 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ECSITQ9BQ95 431 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 CALHM2Q9HA72 323 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 EFCAB1Q9HAE3 211 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 MBNL3Q9NUK0 354 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 GID8Q9NWU2 228 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 TMEM181Q9P2C4 612 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ABCD2Q9UBJ2 740 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ING1Q9UK53 422 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 ANGPT4Q9Y264 503 aa8.46□□□□□ -1.06
NPLOC4-219ENST00000576713 AKAP9Q99996 3911 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 IGKV1D-42A0A075B6H8 117 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 TMED7-TICAM2A0A0A6YYA0 188 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 TRAV20A0A0B4J274 112 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 TMEM247A6NEH6 219 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 FAM47E-STBD1D6RA91 191 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 RAMP1O60894 148 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 TNFSF13O75888 250 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 DCTN3O75935 186 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 LGI1O95970 557 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 SCG5P05408 212 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 NCK1P16333 377 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 ENPP1P22413 925 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 EDNRAP25101 427 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 PTGER4P35408 488 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 MSX2P35548 267 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 TIMP3P35625 211 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 SLC1A3P43003 542 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 GP2P55259 537 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 PER3P56645 1201 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 EGR4Q05215 589 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 SELENBP1Q13228 472 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 NRF1Q16656 503 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 FOXB2Q5VYV0 432 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 HBMQ6B0K9 141 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 WDR88Q6ZMY6 472 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 RINLQ6ZS11 566 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 GRINAQ7Z429 371 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 P3H2Q8IVL5 708 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 MICU2Q8IYU8 434 aa8.45□□□□□ -1.06
NPLOC4-219ENST00000576713 CADM2Q8N3J6 435 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms