RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 ZNF300Q96RE9 604 aaPredicted RBP12.27□□□□□ -0.45
NDE1-211ENST00000576502 CGREF1Q99674 301 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 CPPED1Q9BRF8 314 aaPredicted RBP12.27□□□□□ -0.45
NDE1-211ENST00000576502 SF3B5Q9BWJ5 86 aaKnown RBP12.27□□□□□ -0.45
NDE1-211ENST00000576502 TRIM2Q9C040 744 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 ZNF385DQ9H6B1 395 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 ESRP2Q9H6T0 727 aaKnown RBP12.27□□□□□ -0.45
NDE1-211ENST00000576502 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 MED13LQ71F56 2210 aa12.27□□□□□ -0.45
NDE1-211ENST00000576502 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 PNMTP11086 282 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 RGS8P57771 180 aaPredicted RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 H3F3AP84243 136 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 CAPRIN1Q14444 709 aaKnown RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 OR7A5Q15622 319 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 MMEL1Q495T6 779 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 COQ5Q5HYK3 327 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 OTUD3Q5T2D3 398 aaPredicted RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 FBXW9Q5XUX1 488 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 DLEU7Q6UYE1 221 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 RANBP3LQ86VV4 465 aaPredicted RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 ARMC8Q8IUR7 673 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 LIME1Q9H400 295 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 TMEM27Q9HBJ8 222 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 FGFR1OP2Q9NVK5 253 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 ASB6Q9NWX5 421 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 UPB1Q9UBR1 384 aa12.26□□□□□ -0.45
NDE1-211ENST00000576502 TESQ9UGI8 421 aaKnown RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 ING1Q9UK53 422 aaPredicted RBP12.26□□□□□ -0.45
NDE1-211ENST00000576502 CIB4A0PJX0 185 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ZNF716A6NP11 495 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ARHGEF9O43307 516 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ATP8B1O43520 1251 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 OR2T1O43869 369 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 TMCC2O75069 709 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 NPPAP01160 153 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 THBDP07204 575 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 IMPDH2P12268 514 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 GGT1P19440 569 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ADSLP30566 484 aaPredicted RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 TGFBR3Q03167 851 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 CEACAM7Q14002 265 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ACKR1Q16570 336 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 TRMT5Q32P41 509 aaKnown RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 C1QTNF12Q5T7M4 302 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 TMEM225Q6GV28 225 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 OR7E24Q6IFN5 339 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 CASP12Q6UXS9 341 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ABHD12BQ7Z5M8 362 aaPredicted RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 PATL1Q86TB9 770 aaKnown RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 LSMEM1Q8N8F7 131 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 PCYOX1LQ8NBM8 494 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 OR52E4Q8NGH9 312 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 RASSF5Q8WWW0 418 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ZNF775Q96BV0 537 aaPredicted RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 PLPPR2Q96GM1 343 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 CCL19Q99731 98 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 PIP5K1AQ99755 562 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 ADPRHL2Q9NX46 363 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 TAS2R16Q9NYV7 291 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 DSCAMO60469 2012 aa12.25□□□□□ -0.45
NDE1-211ENST00000576502 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
NDE1-211ENST00000576502 ZC3H12DA2A288 527 aaKnown RBP12.24□□□□□ -0.45
NDE1-211ENST00000576502 OR6C65A6NJZ3 312 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 AQP7P3A6NL99 342 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 CCT8L1PA6NM43 557 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 ARID1AO14497 2285 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 SMPD2O60906 423 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 LYZL6O75951 148 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 CD3EP07766 207 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 ROS1P08922 2347 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 PRG2P13727 222 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 COX5AP20674 150 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 HOXC12P31275 282 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 PPA1Q15181 289 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 STK11Q15831 433 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 TIMM23BQ5SRD1 257 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 ALKBH2Q6NS38 261 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 ULK3Q6PHR2 472 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 ZNF704Q6ZNC4 412 aaPredicted RBP12.24□□□□□ -0.45
NDE1-211ENST00000576502 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
NDE1-211ENST00000576502 GPAT4Q86UL3 456 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 POMGNT2Q8NAT1 580 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
NDE1-211ENST00000576502 SLC38A4Q969I6 547 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms