RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ELOA3Q8NG57 546 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 SLC26A7Q8TE54 656 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 RCN3Q96D15 328 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 ZNF300Q96RE9 604 aaPredicted RBP20.88■□□□□ 0.93
SNF8-217ENST00000576353 TAPBPLQ9BX59 468 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 CLEC4MQ9H2X3 399 aaPredicted RBP20.88■□□□□ 0.93
SNF8-217ENST00000576353 TMEM27Q9HBJ8 222 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 ZNF226Q9NYT6 803 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 SELENONQ9NZV5 590 aa20.88■□□□□ 0.93
SNF8-217ENST00000576353 LIPT2A6NK58 231 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 TMEM229AB2RXF0 380 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 SNX3O60493 162 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 PNMTP11086 282 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 DRD4P21917 467 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 OR3A2P47893 321 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 SLC16A1P53985 500 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 GNGT1P63211 74 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 CEACAM7Q14002 265 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 VEZF1Q14119 521 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 DUSP7Q16829 419 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 C1orf140Q5VVS0 124 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 FAM91A1Q658Y4 838 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 ULK3Q6PHR2 472 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 PAQR6Q6TCH4 344 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 C6orf89Q6UWU4 347 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 STAC2Q6ZMT1 411 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 CCDC80Q76M96 950 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 RANBP3LQ86VV4 465 aaPredicted RBP20.87■□□□□ 0.93
SNF8-217ENST00000576353 RASSF5Q8WWW0 418 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 ZNF775Q96BV0 537 aaPredicted RBP20.87■□□□□ 0.93
SNF8-217ENST00000576353 HDHD5Q9BXW7 423 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 AP3M1Q9Y2T2 418 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 GPR52Q9Y2T5 361 aa20.87■□□□□ 0.93
SNF8-217ENST00000576353 A0A1B0GWA3 101 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 ZNF716A6NP11 495 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 LGI1O95970 557 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 OPN1SWP03999 348 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 HTR2AP28223 471 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 CCKARP32238 428 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 GYS2P54840 703 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 OR7A5Q15622 319 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 ARPINQ7Z6K5 226 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 CCDC103Q8IW40 242 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 ZNF100Q8IYN0 542 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 ZNF583Q96ND8 569 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 EFCAB1Q9HAE3 211 aa20.86■□□□□ 0.93
SNF8-217ENST00000576353 NOSIPQ9Y314 301 aaKnown RBP20.86■□□□□ 0.93
SNF8-217ENST00000576353 ZNF814B7Z6K7 855 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 AIM2O14862 343 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 NPIPB7O75200 414 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 AHSA1O95433 338 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 PSMB1P20618 241 aaKnown RBP20.85■□□□□ 0.93
SNF8-217ENST00000576353 P2RY6Q15077 328 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 OR1Q1Q15612 314 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 ALG10BQ5I7T1 473 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 OTUD3Q5T2D3 398 aaPredicted RBP20.85■□□□□ 0.93
SNF8-217ENST00000576353 C5orf46Q6UWT4 87 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 GABRG1Q8N1C3 465 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 TAMM41Q96BW9 452 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 CMTM5Q96DZ9 223 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 SLC47A1Q96FL8 570 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 PRR14Q9BWN1 585 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 OR10A4Q9H209 315 aa20.85■□□□□ 0.93
SNF8-217ENST00000576353 FMO6PO60774 539 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 CNOT4O95628 575 aaKnown RBP20.84■□□□□ 0.93
SNF8-217ENST00000576353 ANKRD34AQ69YU3 496 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 Q6ZT83 130 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 CDH24Q86UP0 819 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 STEAP2Q8NFT2 490 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 GPR32P1Q8NGA4 272 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 MFSD8Q8NHS3 518 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 ARHGDIGQ99819 225 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 HOPXQ9BPY8 73 aaPredicted RBP20.84■□□□□ 0.93
SNF8-217ENST00000576353 MYLK2Q9H1R3 596 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 ADPRHL2Q9NX46 363 aa20.84■□□□□ 0.93
SNF8-217ENST00000576353 LRBAP50851 2863 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 CREBBPQ92793 2442 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 RAMP1O60894 148 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 AKR7A3O95154 331 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 IFNA14P01570 189 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 SLC17A1Q14916 467 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 NRF1Q16656 503 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 TMEM225Q6GV28 225 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 CXorf67Q86X51 503 aaPredicted RBP20.83■□□□□ 0.93
SNF8-217ENST00000576353 CDC20BQ86Y33 519 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 TREML1Q86YW5 311 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 OR2T12Q8NG77 320 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 RNF217Q8TC41 542 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 SLC38A4Q969I6 547 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 APH1AQ96BI3 265 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 MCHR1Q99705 422 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 USB1Q9BQ65 265 aaKnown RBP20.83■□□□□ 0.93
SNF8-217ENST00000576353 WFDC6Q9BQY6 131 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 SF3B5Q9BWJ5 86 aaKnown RBP20.83■□□□□ 0.93
SNF8-217ENST00000576353 ACTR6Q9GZN1 396 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 PARPBPQ9NWS1 579 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 EDARQ9UNE0 448 aa20.83■□□□□ 0.93
SNF8-217ENST00000576353 A0A0B4J2E0 115 aa20.82■□□□□ 0.92
SNF8-217ENST00000576353 A0A1B0GX12 115 aa20.82■□□□□ 0.92
SNF8-217ENST00000576353 AQP7P3A6NL99 342 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms