RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CHMP1BQ7LBR1 199 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 PIWIL3Q7Z3Z3 882 aaKnown RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 ADGRE4PQ86SQ3 457 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 OFCC1Q8IZS5 231 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 FAM26EQ8N5C1 309 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 TMEM255BQ8WV15 326 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 SLCO4A1Q96BD0 722 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 KTI12Q96EK9 354 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 RSRC1Q96IZ7 334 aaKnown RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 MPP4Q96JB8 637 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 RAB3IPQ96QF0 476 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 PIP5K1AQ99755 562 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 ZNF426Q9BUY5 554 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 PTDSS2Q9BVG9 487 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 FNDC11Q9BVV2 318 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 CHID1Q9BWS9 393 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 MAN2C1Q9NTJ4 1040 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 CCM2LQ9NUG4 571 aaPredicted RBP7.68□□□□□ -1.18
NUP88-211ENST00000575976 HDGFL3Q9Y3E1 203 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 TESMINQ9Y4I5 508 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 FAM215AQ9Y5M1 114 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 FBN2P35556 2912 aa7.68□□□□□ -1.18
NUP88-211ENST00000575976 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 ITPR3Q14573 2671 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TRAV36DV7A0A075B6V5 113 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 A0A087WUU8 490 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 IGHV3-15A0A0B4J1V0 119 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 CD8B2A6NJW9 211 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 LRRN3E7EW58 273 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 E9PLN8 166 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 SULT2B1O00204 365 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 CCL21O00585 134 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 KPNA4O00629 521 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 FKBP6O75344 327 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 SYNGR4O95473 234 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PMS2P2O95744 297 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TGM6O95932 706 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 HOXD4P09016 255 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 KLK2P20151 261 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 FPR1P21462 350 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 CBLP22681 906 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 RRM2P31350 389 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PTGER4P35408 488 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 RBM34P42696 430 aaKnown RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 RPS5P46782 204 aaKnown RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 RIPPLY3P57055 190 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 RAC3P60763 192 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 LSM11P83369 360 aaKnown RBP eCLIP7.67□□□□□ -1.18
NUP88-211ENST00000575976 SPIBQ01892 262 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TRAM2Q15035 370 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PON3Q15166 354 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 SF3B4Q15427 424 aaKnown RBP eCLIP7.67□□□□□ -1.182e-7■■□□□ 14.3
NUP88-211ENST00000575976 OR7A5Q15622 319 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 NSUN5P2Q63ZY6 315 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PPP4R4Q6NUP7 873 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 B3GNT6Q6ZMB0 384 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 FJX1Q86VR8 437 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 MARVELD2Q8N4S9 558 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PAPD5Q8NDF8 572 aaKnown RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 OR52J3Q8NH60 311 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PFN4Q8NHR9 129 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 MFSD8Q8NHS3 518 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TMEM239Q8WW34 195 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 ROBO4Q8WZ75 1007 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TAAR8Q969N4 342 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 CPNE4Q96A23 557 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 DHRS1Q96LJ7 313 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 HS6ST2Q96MM7 605 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 PSMG3-AS1Q96PY0 264 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 UCN2Q96RP3 112 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 DMRTA2Q96SC8 542 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 ZNF347Q96SE7 839 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 VKORC1Q9BQB6 163 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TTYH2Q9BSA4 534 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TMEM43Q9BTV4 400 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 DENND2DQ9H6A0 471 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 CALHM2Q9HA72 323 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 MEPEQ9NQ76 525 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 PAQR5Q9NXK6 330 aaPredicted RBP7.67□□□□□ -1.18
NUP88-211ENST00000575976 CLCF1Q9UBD9 225 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 TRAPPC4Q9Y296 219 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 MEMO1Q9Y316 297 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 DNAJC13O75165 2243 aa7.67□□□□□ -1.18
NUP88-211ENST00000575976 NBPF19A0A087WUL8 3843 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 ZGRF1Q86YA3 2104 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 TRBV4-1A0A0J9YWV2 114 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 A0A1B0GUH1 482 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 A0A1W2PRQ8 180 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 MBD3L4A6NDZ8 208 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 MBD3L3A6NE82 208 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 MBD3L5A6NJ08 208 aaPredicted RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 LIPT2A6NK58 231 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SLC22A20A6NK97 555 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 FTCDNL1E5RQL4 147 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 SMAD9O15198 467 aaKnown RBP7.66□□□□□ -1.18
NUP88-211ENST00000575976 LRRTM2O43300 516 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 OR2T1O43869 369 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 PIP5K1CO60331 668 aa7.66□□□□□ -1.18
NUP88-211ENST00000575976 AQP8O94778 261 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms