RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 FAM69AQ5T7M9 428 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 C1orf185Q5T7R7 199 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 ZFP1Q6P2D0 407 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 OSTF1Q92882 214 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 ZHX1-C8orf76Q96EF9 292 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 UCN2Q96RP3 112 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 TINAGQ9UJW2 476 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 MCTS1Q9ULC4 181 aaKnown RBP15.33■□□□□ 0.04
NUP88-210ENST00000574867 MED31Q9Y3C7 131 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 AP4S1Q9Y587 144 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 CLCA1A8K7I4 914 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 CST1P01037 141 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 FCGR2AP12318 317 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 SLC35A1P78382 337 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 RNF113BQ8IZP6 322 aaKnown RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 MFSD8Q8NHS3 518 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 SLC7A13Q8TCU3 470 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 KTI12Q96EK9 354 aaPredicted RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 PTDSS2Q9BVG9 487 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 REEP1Q9H902 201 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 CALHM2Q9HA72 323 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ZNF462Q96JM2 2506 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 POLEQ07864 2286 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 KIAA1549Q9HCM3 1950 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 TRGV8A0A0C4DH27 118 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 CD8B2A6NJW9 211 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 LIPT2A6NK58 231 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 FZD7O75084 574 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 SYNGR4O95473 234 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 FCGR1AP12314 374 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 GNLYP22749 145 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 RPS5P46782 204 aaKnown RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 UGT2B15P54855 530 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 MFSD13AQ14CX5 517 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ZNF239Q16600 458 aaKnown RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 NSUN5P2Q63ZY6 315 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ZNF730Q6ZMV8 503 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ZNF771Q7L3S4 317 aaPredicted RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 RELTQ969Z4 430 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 ZNF845Q96IR2 970 aaPredicted RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 TRIB1Q96RU8 372 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 CLCF1Q9UBD9 225 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 LYVE1Q9Y5Y7 322 aa15.32■□□□□ 0.04
NUP88-210ENST00000574867 RP1L1Q8IWN7 2480 aaPredicted RBP15.32■□□□□ 0.04
NUP88-210ENST00000574867 HNRNPRO43390 633 aaKnown RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 EIF1BO60739 113 aaKnown RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 MT-ATP6P00846 226 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 IMPDH2P12268 514 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 PON3Q15166 354 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 C1QL3Q5VWW1 255 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 B3GNT6Q6ZMB0 384 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 MBOAT2Q6ZWT7 520 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 RRM2BQ7LG56 351 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 P3H2Q8IVL5 708 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 SRXN1Q9BYN0 137 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 KRCC1Q9NPI7 259 aaPredicted RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 DNAJB9Q9UBS3 223 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 TMCC3Q9ULS5 477 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 FAM215AQ9Y5M1 114 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 A0A087WUU8 490 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 SLC22A20A6NK97 555 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 FTCDNL1E5RQL4 147 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 E9PLN8 166 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 DEAF1O75398 565 aaPredicted RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 PTNP21246 168 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 FUT4P22083 530 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 GTF2E2P29084 291 aaKnown RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 UQCRFS1P47985 274 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 HMGA2P52926 109 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 OR2B6P58173 313 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 FOXD4Q12950 439 aaPredicted RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 OR7A5Q15622 319 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 PODNL1Q6PEZ8 512 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 OR52J3Q8NH60 311 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 TAAR8Q969N4 342 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 VKORC1Q9BQB6 163 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 FUZQ9BT04 418 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 MEPEQ9NQ76 525 aaPredicted RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 SH3BGRL2Q9UJC5 107 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 SAMHD1Q9Y3Z3 626 aaKnown RBP15.31■□□□□ 0.04
NUP88-210ENST00000574867 CORINQ9Y5Q5 1042 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 NBASA2RRP1 2371 aa15.31■□□□□ 0.04
NUP88-210ENST00000574867 TRBV4-1A0A0J9YWV2 114 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 ENO4A6NNW6 628 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 TNFRSF11BO00300 401 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 GNGT2O14610 69 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 TIPRLO75663 272 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 ENPP1P22413 925 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 LIMS1P48059 325 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 RTL6Q6ICC9 239 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 PAQR6Q6TCH4 344 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 RPTNQ6XPR3 784 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 LINC00471Q8N535 108 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 PFN4Q8NHR9 129 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 PYDC1Q8WXC3 89 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 WNT2BQ93097 391 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 ALPK1Q96QP1 1244 aa15.3■□□□□ 0.04
NUP88-210ENST00000574867 TMEM5Q9Y2B1 443 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms