RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SCGB2A2Q13296 93 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 TMEM41BQ5BJD5 291 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 TIGD3Q6B0B8 471 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 CENPLQ8N0S6 344 aaPredicted RBP2.68□□□□□ -1.98
CDC27-216ENST00000574304 TMEM61Q8N0U2 210 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 STXBP6Q8NFX7 210 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 OR4D9Q8NGE8 314 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 GIMAP1Q8WWP7 306 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 NAT9Q9BTE0 207 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 RSPO3Q9BXY4 272 aaPredicted RBP2.68□□□□□ -1.98
CDC27-216ENST00000574304 MEAF6Q9HAF1 191 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 SLC25A37Q9NYZ2 338 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 NPIPA1Q9UND3 350 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 TRAPPC4Q9Y296 219 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 AK6Q9Y3D8 172 aaKnown RBP2.68□□□□□ -1.98
CDC27-216ENST00000574304 MFHAS1Q9Y4C4 1052 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 SCN2AQ99250 2005 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 GAKO14976 1311 aa2.68□□□□□ -1.98
CDC27-216ENST00000574304 TRDCB7Z8K6 153 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 AGPAT2O15120 278 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 ZSCAN12O43309 604 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 NEBLO76041 1014 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 STAMBPO95630 424 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 NT5EP21589 574 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 RFC4P35249 363 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 GLP1RP43220 463 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 VDAC2P45880 294 aaPredicted RBP2.67□□□□□ -1.98
CDC27-216ENST00000574304 NMUP48645 174 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 RPS14P62263 151 aaKnown RBP2.67□□□□□ -1.98
CDC27-216ENST00000574304 IL1RL1Q01638 556 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 INAQ16352 499 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 FAM71E1Q6IPT2 247 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 CNSTQ6PJW8 725 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 SLC22A8Q8TCC7 542 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 ACER1Q8TDN7 264 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 HTR3CQ8WXA8 447 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 STARD8Q92502 1023 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 FGF11Q92914 225 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 PAGE5Q96GU1 130 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 FCRL1Q96LA6 429 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 GPR61Q9BZJ8 451 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 TMEM117Q9H0C3 514 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 DPH5Q9H2P9 285 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
CDC27-216ENST00000574304 DEC1Q9P2X7 70 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 GNPTGQ9UJJ9 305 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 RASD1Q9Y272 281 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 U3KQV3 271 aa2.67□□□□□ -1.98
CDC27-216ENST00000574304 GPRASP1Q5JY77 1395 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 HIP1O00291 1037 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 TRIM16O95361 564 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 TDGF1P13385 188 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 IGFBP3P17936 291 aaPredicted RBP2.66□□□□□ -1.98
CDC27-216ENST00000574304 CALCRP30988 508 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 FMO3P31513 532 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 TDGF1P3P51864 188 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 CNTN2Q02246 1040 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 PJVKQ0ZLH3 352 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 CCDC57Q2TAC2 916 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 BCL7AQ4VC05 210 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 TP53I3Q53FA7 332 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 ABHD12BQ7Z5M8 362 aaPredicted RBP2.66□□□□□ -1.98
CDC27-216ENST00000574304 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 RAET1EQ8TD07 263 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 SPRYD4Q8WW59 207 aaPredicted RBP2.66□□□□□ -1.98
CDC27-216ENST00000574304 FAM3CQ92520 227 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 SEC22AQ96IW7 307 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 C4orf36Q96KX1 117 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 RIT2Q99578 217 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 GPA33Q99795 319 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 NIPSNAP3BQ9BS92 247 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 ALG12Q9BV10 488 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 LHX9Q9NQ69 397 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 CCL28Q9NRJ3 127 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 STAP1Q9ULZ2 295 aa2.66□□□□□ -1.98
CDC27-216ENST00000574304 PPIAL4EA0A075B759 164 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 PPIAL4DF5H284 164 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 CLDN3O15551 220 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 MBTPS2O43462 519 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 SPAG7O75391 227 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 PPIAL4FP0DN26 164 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 POU2F1P14859 743 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 MNAT1P51948 309 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 EFNB2P52799 333 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 ATP6AP1Q15904 470 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 DEFB116Q30KQ4 102 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 SLC25A52Q3SY17 297 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 PARP15Q460N3 678 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 GGTA1PQ4G0N0 100 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 FRMPD2BQ6IN97 320 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 PAQR7Q86WK9 346 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 CATSPER1Q8NEC5 780 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 OR4K14Q8NGD5 310 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 TSNARE1Q96NA8 513 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 SLC17A5Q9NRA2 495 aa2.65□□□□□ -1.99
CDC27-216ENST00000574304 SF3B1O75533 1304 aaKnown RBP eCLIP2.65□□□□□ -1.997e-6■■■■■ 33.4
CDC27-216ENST00000574304 TMEM150BA6NC51 233 aa2.64□□□□□ -1.99
CDC27-216ENST00000574304 SS18L1O75177 396 aaPredicted RBP2.64□□□□□ -1.99
CDC27-216ENST00000574304 TM7SF2O76062 418 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms