RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 L3MBTL1Q9Y468 752 aa1.72□□□□□ -2.13
CHD3-217ENST00000574022 MMP24Q9Y5R2 645 aa1.72□□□□□ -2.13
CHD3-217ENST00000574022 GMEB1Q9Y692 573 aa1.72□□□□□ -2.13
CHD3-217ENST00000574022 MAP3K19Q56UN5 1328 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CNTNAP2Q9UHC6 1331 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IGHV3OR16-12A0A075B7B8 117 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IGHV4-30-2A0A087WSY4 118 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 KCNE1BA0A087WTH5 132 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 NSG1A0A0A6YYJ2 146 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 KBTBD11-OT1A0A1B0GTJ5 212 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 A0A1B0GUV1 79 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 TMEM120BA0PK00 339 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ERICH2A1L162 156 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MEIOCA2RUB1 952 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR6C74A6NCV1 312 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR5B21A6NL26 309 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 VSTM2BA6NLU5 285 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 B4DXG7 233 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FAM72CH0Y354 149 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 BMPR1BO00238 502 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SIRPB1O00241 398 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 NTN3O00634 580 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 DYNC1I1O14576 645 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 POLR1CO15160 346 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 SNAP91O60641 907 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 UGT1A9O60656 530 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 HCN1O60741 890 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SCRG1O75711 98 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CABYRO75952 493 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR7A10O76100 309 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ERLIN2O94905 339 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CCNB2O95067 398 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 C1orf105O95561 183 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FGFR1OPO95684 399 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 APOA1P02647 267 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SERPINB2P05120 415 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CD55P08174 381 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CLTAP09496 248 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 H2AFZP0C0S5 128 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 PATE4P0C8F1 98 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 GATA1P15976 413 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 BCKDHBP21953 392 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IDSP22304 550 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IGFBP5P24593 272 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CALCRP30988 508 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 EPHX2P34913 555 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 VHLP40337 213 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 LEPP41159 167 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 NSG1P42857 185 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR1D4P47884 311 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MRPL19P49406 292 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 ARRB1P49407 418 aaPredicted RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 THBS3P49746 956 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 TMED10P49755 219 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 CSRP3P50461 194 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CCNG1P51959 295 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 KPNA2P52292 529 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 EFNA3P52797 238 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 IST1P53990 364 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CLDN18P56856 261 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 NANOS2P60321 138 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 NANOS3P60323 173 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 YWHAEP62258 255 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 RPS14P62263 151 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 MRPS11P82912 194 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 MRPS21P82921 87 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 SELENBP1Q13228 472 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FHL1Q13642 323 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 GRB7Q14451 532 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 GNMTQ14749 295 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CCL14Q16627 93 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 DGUOKQ16854 277 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 HSDL1Q3SXM5 330 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ZNF718Q3SXZ3 478 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 MOGAT2Q3SYC2 334 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ZNF585BQ52M93 769 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 CARD16Q5EG05 197 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 VWA2Q5GFL6 755 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ADAMTSL4-AS1Q5T5F5 129 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 STPG1Q5TH74 334 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FAM72AQ5TYM5 149 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 METTL11BQ5VVY1 283 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 BSPRYQ5W0U4 402 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 STUMQ69YW2 141 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 OR52W1Q6IF63 320 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FAM72DQ6L9T8 149 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ARMCX5Q6P1M9 558 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ZNF836Q6ZNA1 936 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SLC25A48Q6ZT89 311 aaKnown RBP1.71□□□□□ -2.14
CHD3-217ENST00000574022 STXBP4Q6ZWJ1 553 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 PGAP1Q75T13 922 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SMIM29Q86T20 159 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 FAM72BQ86X60 149 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 DCUN1D3Q8IWE4 304 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 SYCE1Q8N0S2 351 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 TMEM104Q8NE00 496 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 PROKR2Q8NFJ6 384 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ZNF596Q8TC21 504 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 LRRC20Q8TCA0 184 aa1.71□□□□□ -2.14
CHD3-217ENST00000574022 ZPLD1Q8TCW7 415 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms