RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 SELPLGQ14242 412 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 QPRTQ15274 297 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 ATP6AP1Q15904 470 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 MAPK14Q16539 360 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 SYPL1Q16563 259 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 CYP51A1Q16850 503 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 CTU2Q2VPK5 515 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 TYW3Q6IPR3 259 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 IZUMO2Q6UXV1 221 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 FRRS1Q6ZNA5 592 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 ZNF619Q8N2I2 560 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 ICA1LQ8NDH6 482 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 OR10A6Q8NH74 314 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 PNPT1Q8TCS8 783 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 OIT3Q8WWZ8 545 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 OSTF1Q92882 214 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 ARSGQ96EG1 525 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 MRGPRX4Q96LA9 322 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 TRNT1Q96Q11 434 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 POLDIP3Q9BY77 421 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 SAP130Q9H0E3 1048 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 OPN3Q9H1Y3 402 aaPredicted RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 RAD21L1Q9H4I0 556 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 Q9H521 79 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 DCAF13Q9NV06 445 aaKnown RBP8.13□□□□□ -1.11
NDE1-207ENST00000573203 NDRG3Q9UGV2 375 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 EGFL7Q9UHF1 273 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 CLEC4AQ9UMR7 237 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 PROCRQ9UNN8 238 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 LIPT1Q9Y234 373 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 SLC35A3Q9Y2D2 325 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 EMC9Q9Y3B6 208 aa8.13□□□□□ -1.11
NDE1-207ENST00000573203 HRNRQ86YZ3 2850 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 SH3D21A4FU49 640 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 CXCR6O00574 342 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 CASKO14936 926 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 EFNA2O43921 213 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 RAP2AP10114 183 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 NR2F1P10589 423 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 POU2F1P14859 743 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 PGCP20142 388 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 PEX2P28328 305 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 SHC1P29353 583 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 CD79BP40259 229 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 CHRNEQ04844 493 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 MERTKQ12866 999 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 FADDQ13158 208 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 SELENBP1Q13228 472 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 DAZAP2Q15038 168 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 TMEM176BQ3YBM2 270 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 FAM98BQ52LJ0 330 aaKnown RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 SLC25A53Q5H9E4 307 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 COX20Q5RI15 118 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 LPCAT4Q643R3 524 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 GTF2IRD2BQ6EKJ0 949 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 FAM214BQ7L5A3 538 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 HMGN2P46Q86SG4 172 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 GTF2IRD2Q86UP8 949 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 SLC30A8Q8IWU4 369 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ZNF610Q8N9Z0 462 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ZNF563Q8TA94 476 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ZFP90Q8TF47 636 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 TMEM234Q8WY98 164 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 LRTOMTQ8WZ04 291 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ROBO4Q8WZ75 1007 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ST8SIA1Q92185 356 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ZG16BQ96DA0 208 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 GMPPAQ96IJ6 420 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 DACH2Q96NX9 599 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 BDH2Q9BUT1 245 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 C9orf16Q9BUW7 83 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 OSBPL10Q9BXB5 764 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 QRSL1Q9H0R6 528 aaKnown RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 CLEC4MQ9H2X3 399 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 IKZF5Q9H5V7 419 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 TPT1P8Q9HAU6 139 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 SERINC1Q9NRX5 453 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 GLRX2Q9NS18 164 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 RASSF1Q9NS23 344 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.12□□□□□ -1.11
NDE1-207ENST00000573203 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
NDE1-207ENST00000573203 PRAMEF27A3QJZ7 478 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 FAM221AA4D161 298 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 MAGEA13PA6NCF6 341 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 CLDN24A6NM45 220 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 ETV2O00321 342 aaPredicted RBP8.11□□□□□ -1.11
NDE1-207ENST00000573203 GSTA4O15217 222 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 SS18L1O75177 396 aaPredicted RBP8.11□□□□□ -1.11
NDE1-207ENST00000573203 DEAF1O75398 565 aaPredicted RBP8.11□□□□□ -1.11
NDE1-207ENST00000573203 NTN1O95631 604 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 CGAP01215 116 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 CHRM4P08173 479 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 PABPC4LP0CB38 370 aaKnown RBP8.11□□□□□ -1.11
NDE1-207ENST00000573203 CD8BP10966 210 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 ETFAP13804 333 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 RYKP34925 604 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 CRATP43155 626 aa8.11□□□□□ -1.11
NDE1-207ENST00000573203 ERFP50548 548 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms