RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GCNT6Q5T4J0 391 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 ADAM5Q6NVV9 412 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 C20orf204Q6ZNR8 217 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 GALNT5Q7Z7M9 940 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 MAL2Q969L2 176 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 SMR3AQ99954 134 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 CACYBPQ9HB71 228 aaKnown RBP15.28■□□□□ 0.04
SMG6-212ENST00000573153 NPHS2Q9NP85 383 aa15.28■□□□□ 0.04
SMG6-212ENST00000573153 LEF1Q9UJU2 399 aaPredicted RBP15.28■□□□□ 0.04
SMG6-212ENST00000573153 CADP27708 2225 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 DPRXA6NFQ7 191 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 TMEM229AB2RXF0 380 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 GPR171O14626 319 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 FOSL1P15407 271 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 HOXB4P17483 251 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 CCNA2P20248 432 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 NR1H2P55055 460 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 SLC35A1P78382 337 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 CAPRIN1Q14444 709 aaKnown RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 SLC17A1Q14916 467 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 ADRM1Q16186 407 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 ZNF311Q5JNZ3 666 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 Q5PR19 223 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 REEP3Q6NUK4 255 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 BHLHA15Q7RTS1 189 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 SERPINA11Q86U17 422 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 CIARTQ8N365 385 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 ZNF433Q8N7K0 673 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 ZIC4Q8N9L1 334 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 NEUROG1Q92886 237 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 KISS1RQ969F8 398 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 C3orf49Q96BT1 292 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 CCL19Q99731 98 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 CPPED1Q9BRF8 314 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 ZNF701Q9NV72 531 aaPredicted RBP15.27■□□□□ 0.04
SMG6-212ENST00000573153 MALT1Q9UDY8 824 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 DCTN4Q9UJW0 460 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 FLVCR1Q9Y5Y0 555 aa15.27■□□□□ 0.04
SMG6-212ENST00000573153 ARID1AO14497 2285 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 LIPT2A6NK58 231 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 C5orf58C9J3I9 102 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 HS3ST1O14792 307 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 ITGA5P08648 1049 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 DANCRP0C864 163 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 NCF2P19878 526 aaPredicted RBP15.26■□□□□ 0.03
SMG6-212ENST00000573153 FPR1P21462 350 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 COPZ1P61923 177 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 CDK6Q00534 326 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 RUNDC3AQ59EK9 446 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 SHEQ5VZ18 495 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 DHRS4L2Q6PKH6 230 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 PAQR6Q6TCH4 344 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 SSX8Q7RTT4 187 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 ZNF611Q8N823 705 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 HSD17B8Q92506 261 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 PIGTQ969N2 578 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 POM121Q96HA1 1249 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 GSX2Q9BZM3 304 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 AMBRA1Q9C0C7 1298 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 PIF1Q9H611 641 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 MRGBPQ9NV56 204 aa15.26■□□□□ 0.03
SMG6-212ENST00000573153 A8MVM7 634 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 EVPLLA8MZ36 301 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 FRS3O43559 492 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 IGHV3-9P01782 118 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 IL32P24001 234 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 CXCR1P25024 350 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 ADSLP30566 484 aaPredicted RBP15.25■□□□□ 0.03
SMG6-212ENST00000573153 OR2B6P58173 313 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 EGR4Q05215 589 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 FBXW9Q5XUX1 488 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 C6orf89Q6UWU4 347 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 PRSS57Q6UWY2 283 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 RETREG3Q86VR2 466 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 KRT73Q86Y46 540 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 LSMEM1Q8N8F7 131 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 NFKBIDQ8NI38 313 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 THOC1Q96FV9 657 aaKnown RBP15.25■□□□□ 0.03
SMG6-212ENST00000573153 COX4I2Q96KJ9 171 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 ANKRD27Q96NW4 1050 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 WFDC6Q9BQY6 131 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 NAA11Q9BSU3 229 aaPredicted RBP15.25■□□□□ 0.03
SMG6-212ENST00000573153 PTDSS2Q9BVG9 487 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 SPATA5L1Q9BVQ7 753 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 CCDC134Q9H6E4 229 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 C12orf10Q9HB07 376 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 NDUFAF1Q9Y375 327 aa15.25■□□□□ 0.03
SMG6-212ENST00000573153 USF3Q68DE3 2245 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 A0A0G2JND7 137 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 SHISA9B4DS77 424 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 FTCDNL1E5RQL4 147 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 OVOL3O00110 214 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 SMPD2O60906 423 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 GPIP06744 558 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 SOD3P08294 240 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 HTR2AP28223 471 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 IDUAP35475 653 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 PTH2RP49190 550 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 HOXC5Q00444 222 aa15.24■□□□□ 0.03
SMG6-212ENST00000573153 BSPH1Q075Z2 132 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms