RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 IL7RP16871 459 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 HOXB9P17482 250 aaPredicted RBP15.91■□□□□ 0.14
CHD3-214ENST00000572579 FKBP2P26885 142 aaKnown RBP15.91■□□□□ 0.14
CHD3-214ENST00000572579 HTR3AP46098 478 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 TXNL4AP83876 142 aaKnown RBP15.91■□□□□ 0.14
CHD3-214ENST00000572579 BEND6Q5SZJ8 279 aaPredicted RBP15.91■□□□□ 0.14
CHD3-214ENST00000572579 TSPO2Q5TGU0 170 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 C9orf135Q5VTT2 229 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 TMEM99Q8N816 258 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 MUCL1Q96DR8 90 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 AMBRA1Q9C0C7 1298 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 SLCO5A1Q9H2Y9 848 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 TPT1P8Q9HAU6 139 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 ASB6Q9NWX5 421 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 B3GALT5Q9Y2C3 310 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 CUBNO60494 3623 aa15.91■□□□□ 0.14
CHD3-214ENST00000572579 A0A1W2PP18 115 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 GPR171O14626 319 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 MRPL33O75394 65 aaKnown RBP15.9■□□□□ 0.14
CHD3-214ENST00000572579 AKR7A3O95154 331 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 KRT75O95678 551 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 CD40P25942 277 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 ZNF83P51522 516 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 SLC35A1P78382 337 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 CEACAM7Q14002 265 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 C11orf71Q6IPW1 123 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 CROCCP2Q86T23 111 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 C10orf111Q8N326 155 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 OR52P1PQ8NH57 321 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 GTF2H4Q92759 462 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 PMM1Q92871 262 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 ZHX1-C8orf76Q96EF9 292 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 ZNF385AQ96PM9 386 aaKnown RBP15.9■□□□□ 0.14
CHD3-214ENST00000572579 ZBTB18Q99592 522 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 MDFIQ99750 246 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 TAS2R16Q9NYV7 291 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 ZIM2Q9NZV7 527 aa15.9■□□□□ 0.14
CHD3-214ENST00000572579 CIB4A0PJX0 185 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 CCT8L1PA6NM43 557 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 NPIPB7O75200 414 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 BCHEP06276 602 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 CRATP43155 626 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 MAGEA8P43361 318 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 CDH11P55287 796 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 IRX1P78414 480 aaPredicted RBP15.89■□□□□ 0.13
CHD3-214ENST00000572579 LGALS3BPQ08380 585 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 LRRC74AQ0VAA2 488 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 ATG16L1Q676U5 607 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 PAQR6Q6TCH4 344 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 COMTD1Q86VU5 262 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 MSRB3Q8IXL7 192 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 DDIT4LQ96D03 193 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 TMEM19Q96HH6 336 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 REG4Q9BYZ8 158 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 GRIP2Q9C0E4 1043 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 PAIP1Q9H074 479 aaKnown RBP15.89■□□□□ 0.13
CHD3-214ENST00000572579 SLC52A3Q9NQ40 469 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 SLAMF8Q9P0V8 285 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 ZNF443Q9Y2A4 671 aaPredicted RBP15.89■□□□□ 0.13
CHD3-214ENST00000572579 PCDHB14Q9Y5E9 798 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 PLCE1Q9P212 2302 aa15.89■□□□□ 0.13
CHD3-214ENST00000572579 SLCO1B7G3V0H7 640 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 EIF1BO60739 113 aaKnown RBP15.88■□□□□ 0.13
CHD3-214ENST00000572579 IDUAP35475 653 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 POLR2JP52435 117 aaKnown RBP15.88■□□□□ 0.13
CHD3-214ENST00000572579 HOXC5Q00444 222 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 VEZF1Q14119 521 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 OR7A5Q15622 319 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 GSTA3Q16772 222 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 SLC2A7Q6PXP3 512 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 EPGNQ6UW88 154 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 CASP12Q6UXS9 341 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 SERPINA11Q86U17 422 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 FUNDC1Q8IVP5 155 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 PEX5LQ8IYB4 626 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 HTRA1Q92743 480 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 MAL2Q969L2 176 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 GTPBP3Q969Y2 492 aaKnown RBP15.88■□□□□ 0.13
CHD3-214ENST00000572579 SLC25A37Q9NYZ2 338 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 P2RX2Q9UBL9 471 aa15.88■□□□□ 0.13
CHD3-214ENST00000572579 ABCA1O95477 2261 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 A0A096LNT2 108 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 AQP7P3A6NL99 342 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 KLF11O14901 512 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 UBDO15205 165 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 FRS3O43559 492 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 ANXA11P50995 505 aaKnown RBP15.87■□□□□ 0.13
CHD3-214ENST00000572579 MAP2K6P52564 334 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 DSTNP60981 165 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 LIN52Q52LA3 116 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 OTUD3Q5T2D3 398 aaPredicted RBP15.87■□□□□ 0.13
CHD3-214ENST00000572579 LINGO2Q7L985 606 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 PIAS4Q8N2W9 510 aaPredicted RBP15.87■□□□□ 0.13
CHD3-214ENST00000572579 CADM2Q8N3J6 435 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 OR9K2Q8NGE7 335 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 TMEM45BQ96B21 275 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 C3orf49Q96BT1 292 aa15.87■□□□□ 0.13
CHD3-214ENST00000572579 TRMT61AQ96FX7 289 aaKnown RBP15.87■□□□□ 0.13
CHD3-214ENST00000572579 NAA11Q9BSU3 229 aaPredicted RBP15.87■□□□□ 0.13
CHD3-214ENST00000572579 SLC17A5Q9NRA2 495 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms