RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 USF1P22415 310 aaPredicted RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 S100A3P33764 101 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 RPL14P50914 215 aaKnown RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 ABCE1P61221 599 aaKnown RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 PHC1P78364 1004 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 LSM11P83369 360 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSR1-202ENST00000571806 FUT5Q11128 374 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 B3GLCTQ6Y288 498 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 LRRC74BQ6ZQY2 392 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 OLIG3Q7RTU3 272 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 ANKRD46Q86W74 232 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 ZNF440Q8IYI8 595 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 ZNF781Q8N8C0 355 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 OR52E4Q8NGH9 312 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 CCDC115Q96NT0 180 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 SHARPINQ9H0F6 387 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 MOV10Q9HCE1 1003 aaKnown RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 MYOZ1Q9NP98 299 aaPredicted RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 OSGIN1Q9UJX0 560 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 FBXO9Q9UK97 447 aaPredicted RBP13.62□□□□□ -0.23
TSR1-202ENST00000571806 FKBP7Q9Y680 259 aa13.62□□□□□ -0.23
TSR1-202ENST00000571806 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 BCAS1O75363 584 aaPredicted RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 GPIP06744 558 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 DBIP07108 87 aaKnown RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 IMPDH2P12268 514 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 LBPP18428 481 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 CCNA2P20248 432 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 TACR3P29371 465 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 GZMKP49863 264 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 TSPO2Q5TGU0 170 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 WDR60Q8WVS4 1066 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 CNOT9Q92600 299 aaKnown RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 PPP1R36Q96LQ0 422 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 ZNF317Q96PQ6 595 aaPredicted RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 TMEM109Q9BVC6 243 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 C1QTNF6Q9BXI9 259 aa13.61□□□□□ -0.23
TSR1-202ENST00000571806 SSU72Q9NP77 194 aaKnown RBP13.61□□□□□ -0.23
TSR1-202ENST00000571806 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 OR6C65A6NJZ3 312 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 CLDN24A6NM45 220 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 TM9SF1O15321 606 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 ITM2AO43736 263 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 VAMP5O95183 116 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 CXCR1P25024 350 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 CHI3L2Q15782 390 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 ZSWIM7Q19AV6 140 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 FAM174BQ3ZCQ3 159 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 SPANXN4Q5MJ08 99 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
TSR1-202ENST00000571806 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 ZNF540Q8NDQ6 660 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 KCNS3Q9BQ31 491 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 SLC38A1Q9H2H9 487 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 MANSC1Q9H8J5 431 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 HAO1Q9UJM8 370 aa13.6□□□□□ -0.23
TSR1-202ENST00000571806 PRAMEF27A3QJZ7 478 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 CCDC154A6NI56 674 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 LMX1BO60663 402 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 KRT33AO76009 404 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 NR2F1P10589 423 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 CREB1P16220 341 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 RPS4Y1P22090 263 aaKnown RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 SLC1A6P48664 564 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 PDLIM4P50479 330 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 COPZ1P61923 177 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 SNRPD2P62316 118 aaKnown RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 PLAURQ03405 335 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 EPS8Q12929 822 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 SYPL1Q16563 259 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 SWI5Q1ZZU3 235 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 C9orf135Q5VTT2 229 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 OGFOD2Q6N063 350 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 AAED1Q7RTV5 226 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 NANOS1Q8WY41 292 aaKnown RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 DNAJA3Q96EY1 480 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 PIMREGQ9BSJ6 248 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 TAPBPLQ9BX59 468 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 CALML5Q9NZT1 146 aa13.59□□□□□ -0.23
TSR1-202ENST00000571806 YLPM1P49750 1951 aaKnown RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
TSR1-202ENST00000571806 A0A096LPI6 279 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 LOC390937A0A1W2PQ73 354 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 AQP7P3A6NL99 342 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 AP3D1O14617 1153 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 PDE5AO76074 875 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 KRT75O95678 551 aa13.58□□□□□ -0.24
TSR1-202ENST00000571806 CRYAAP02489 173 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms