RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZNF708P17019 499 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 PTNP21246 168 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 PSMA4P25789 261 aaKnown RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 ZNF136P52737 540 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CLDN18P56856 261 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 SORDQ00796 357 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 BNIP2Q12982 314 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 SGCBQ16585 318 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 WBP2NLQ6ICG8 309 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CYP2R1Q6VVX0 501 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 GRINAQ7Z429 371 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 YTHDF3Q7Z739 585 aaKnown RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 VTCN1Q7Z7D3 282 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 RANBP3LQ86VV4 465 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CXorf67Q86X51 503 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CARM1Q86X55 608 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 PM20D2Q8IYS1 436 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 OR4D11Q8NGI4 311 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 OR6T1Q8NGN1 323 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 RASSF5Q8WWW0 418 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 LZICQ8WZA0 190 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 PIGTQ969N2 578 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 CCDC124Q96CT7 223 aaKnown RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 SLC7A6OSQ96CW6 309 aaPredicted RBP11.92□□□□□ -0.5
CCDC40-205ENST00000571028 OR5B2Q96R09 309 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 ARHGDIGQ99819 225 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM27Q9HBJ8 222 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 STOML1Q9UBI4 398 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 OSGIN1Q9UJX0 560 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 BAG5Q9UL15 447 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 SLC9A8Q9Y2E8 581 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 TMED7Q9Y3B3 224 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 AP4B1Q9Y6B7 739 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 FREM3P0C091 2139 aa11.92□□□□□ -0.5
CCDC40-205ENST00000571028 HIVEP2P31629 2446 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 ZNF407Q9C0G0 2248 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 A0A0J9YW62 118 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 A0A1W2PNR3 127 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 TMEM72A0PK05 275 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 C7orf72A4D263 438 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 LINC01387J3KSC0 135 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CASKO14936 926 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 ARPC2O15144 300 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CXCL13O43927 109 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 HRGP04196 525 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CPN1P15169 458 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CXCR1P25024 350 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 HTR2AP28223 471 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SLC7A1P30825 629 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 APOBEC1P41238 236 aaKnown RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SLC1A3P43003 542 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 YAP1P46937 504 aaKnown RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 EIF1AXP47813 144 aaKnown RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 POLR2HP52434 150 aaKnown RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CLDN15P56746 228 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 RAC1P63000 192 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SELENBP1Q13228 472 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SF3B4Q15427 424 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 OR1Q1Q15612 314 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 NPTX1Q15818 432 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SLC25A53Q5H9E4 307 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CCDC121Q6ZUS5 278 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 NAXEQ8NCW5 288 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 ZNF845Q96IR2 970 aaPredicted RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 HSH2DQ96JZ2 352 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 BTBD10Q9BSF8 475 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 OR11A1Q9GZK7 315 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 C1orf21Q9H246 121 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 SELENONQ9NZV5 590 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 TESQ9UGI8 421 aaKnown RBP11.91□□□□□ -0.5
CCDC40-205ENST00000571028 CHRNA9Q9UGM1 479 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 MAGEL2Q9UJ55 1249 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 MED12Q93074 2177 aa11.91□□□□□ -0.5
CCDC40-205ENST00000571028 A0A1B0GWA3 101 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 TRIM64A6NGJ6 449 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 TRIM64BA6NI03 449 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ELOA3DA6NLF2 546 aaPredicted RBP11.9□□□□□ -0.5
CCDC40-205ENST00000571028 GJE1A6NN92 205 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 AHRRA9YTQ3 701 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 FAAHO00519 579 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 EBAG9O00559 213 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 TPST2O60704 377 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 NTN1O95631 604 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ADH6P28332 368 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 HTR3AP46098 478 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 RPS3AP61247 264 aaKnown RBP11.9□□□□□ -0.5
CCDC40-205ENST00000571028 SELENOWP63302 87 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ATRQ13535 2644 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 NRF1Q16656 503 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ELOA3BQ3SY89 546 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ACSF3Q4G176 576 aaPredicted RBP11.9□□□□□ -0.5
CCDC40-205ENST00000571028 ENTPD8Q5MY95 495 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 C3orf33Q6P1S2 294 aa11.9□□□□□ -0.5
CCDC40-205ENST00000571028 PRSS57Q6UWY2 283 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms