RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RNF130Q86XS8 419 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 SPACA3Q8IXA5 215 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 PLPPR2Q96GM1 343 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 MAGEB18Q96M61 343 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 OR6C1Q96RD1 312 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 TMEM43Q9BTV4 400 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 SPATA5L1Q9BVQ7 753 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 FNDC11Q9BVV2 318 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 CNOT2Q9NZN8 540 aaKnown RBP6.14□□□□□ -1.43
SMG1-217ENST00000569764 NDRG3Q9UGV2 375 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 RNF150Q9ULK6 438 aa6.14□□□□□ -1.43
SMG1-217ENST00000569764 WDR87Q6ZQQ6 2873 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ANKRD12Q6UB98 2062 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 TRGV8A0A0C4DH27 118 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 A0A0D9SEW6 157 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 SSX4O60224 188 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 UBOX5O94941 541 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 IGLV3-27P01718 113 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ITGAMP11215 1152 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MMP9P14780 707 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PSMB6P28072 239 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 GKP32189 559 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 RPS15AP62244 130 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 PLAURQ03405 335 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 SLC10A7Q0GE19 358 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PDE7AQ13946 482 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PTPRCAPQ14761 206 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PLEKHN1Q494U1 663 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 ZNF789Q5FWF6 425 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 DESI1Q6ICB0 168 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 WDR74Q6RFH5 385 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 DCDC5Q6ZRR9 648 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ZCCHC23Q6ZST2 131 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 LRRC18Q8N456 261 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PROKR2Q8NFJ6 384 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 TMEM186Q96B77 213 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 NARS2Q96I59 477 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 NSL1Q96IY1 281 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MEGF10Q96KG7 1140 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 HRH4Q9H3N8 390 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PTGES2Q9H7Z7 377 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 RHOFQ9HBH0 211 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MKKSQ9NPJ1 570 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 ARL15Q9NXU5 204 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 NDUFAF1Q9Y375 327 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 KDM4EB2RXH2 506 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 KLF11O14901 512 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PRKRAO75569 313 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 CD8BP10966 210 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PSKH1P11801 424 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 CD36P16671 472 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 RAB3AP20336 220 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 EDN2P20800 178 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 CNR1P21554 472 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ME2P23368 584 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 OR4D2P58180 307 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 TRIP10Q15642 601 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 FAHD2BQ6P2I3 314 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 RIPOR1Q6ZS17 1223 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 BHLHA15Q7RTS1 189 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 SLC26A11Q86WA9 606 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ZFAND4Q86XD8 727 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 KLHDC8BQ8IXV7 354 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 DCBLD1Q8N8Z6 715 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 OR4E2Q8NGC2 313 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 PCNPQ8WW12 178 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 KCNJ9Q92806 393 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 FAHD2AQ96GK7 314 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 WFIKKN1Q96NZ8 548 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MND1Q9BWT6 205 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 CALHM2Q9HA72 323 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 SPHK1Q9NYA1 384 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 SMCO3A2RU48 225 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 M0QXV9 152 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 EDF1O60869 148 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 F10P00742 488 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 CEACAM5P06731 702 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 T-ENOLP0DO92 83 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 ADRA1AP35348 466 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 F2RL1P55085 397 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 TMEM135Q86UB9 458 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 THOC6Q86W42 341 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 ZNF610Q8N9Z0 462 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 KYQ8NBH2 561 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 RAB40AQ8WXH6 277 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MIB2Q96AX9 1013 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 MRGPRX2Q96LB1 330 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 SFXN2Q96NB2 322 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 RNF2Q99496 336 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 CCDC59Q9P031 241 aaKnown RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 CGGBP1Q9UFW8 167 aaPredicted RBP6.13□□□□□ -1.43
SMG1-217ENST00000569764 MIOXQ9UGB7 285 aa6.13□□□□□ -1.43
SMG1-217ENST00000569764 A0A1W2PQF6 199 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 OR5K3A6NET4 321 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 AGAP5A6NIR3 686 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 TGOLN2O43493 480 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 ITM2AO43736 263 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 NUAK1O60285 661 aa6.12□□□□□ -1.43
SMG1-217ENST00000569764 PSMG1O95456 288 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms